Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq5 95.1 1e-14
seq1 89.7 5e-13
>seq5
Length=5891385
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
||||| || || ||||| || || || ||||| || | ||| ||| ||||| ||
Sbjct 1785110 TGCAGAGTAGACTCCTTCTGAATGTTGTAATCACTCAGGGTGCGGCCATCCTCCAACTGC 1785051
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | |||| || ||||||||||| || || || || || || || || ||
Sbjct 1785050 TTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTG 1784991
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|||| || | || | ||||| || ||||||||||| || |||| ||| || |||||
Sbjct 1784990 CTCTTGA-CGTTGTCGATCGTGTCTGATGACTCGACTTCCAGCGTAATCGTCTTTCCGGT 1784932
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || ||||| |||||
Sbjct 1784931 CAGGGTCTTGACGAAAATCTGCAT 1784908
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || || || ||||| ||||| || || ||| || || | ||| ||
Sbjct 1784372 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCATCCTCG 1784313
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| || ||||| || | |||| || ||||| ||||| ||||||||||| || || ||
Sbjct 1784312 AGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGG 1784253
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
|| || |||| || | ||| || || |||||||| || ||||| | || |||
Sbjct 1784252 ATCTTGGACTTGACATTGTCAATGGTATCCGAGGACTCGACCTCAAGAGTGATGGTCTTG 1784193
Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATCGCG 45344
||||| || || || || || || |||||||||
Sbjct 1784192 CCGGTAAGGGTCTTGACGAAGATCTGCATCGCG 1784160
>seq1
Length=8787864
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | || || || || || || || ||||| ||||| || || |||||
Sbjct 8578498 CCACCACGGAGGCGCAGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTC 8578557
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| ||| |||| || || || ||| | |||| || ||||||||||| |||
Sbjct 8578558 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 8578617
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| || || || || || || || |||| || | ||||||||||||||| ||
Sbjct 8578618 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 8578677
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || | || || || || || || || || || || |||||
Sbjct 8578678 TCAAGGGTGATAGTCTTACCCGTAAGGGTCTTGACGAAGATCTGCAT 8578724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003126549480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |