Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1 122 1e-22
seq3 86.0 8e-12
>seq1
Length=8787864
Score = 122 bits (134), Expect = 1e-22
Identities = 284/427 (67%), Gaps = 20/427 (5%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| ||||| ||||||||||||||||| ||||| ||| | ||| ||| ||||||||
Sbjct 4219074 GTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCAT 4219015
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345
|| || || ||||| | ||| | | | |||| || | |||
Sbjct 4219014 GAAGTCGAAGGGGTTGGTGGAGCGGTAGACCTTCTCGTTG-----CCGAGGGCGACGAGC 4218960
Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405
||||| || | |||| |||||||||||| ||| | |||||||| |||| ||
Sbjct 4218959 AGACGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGA 4218900
Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465
|| || || || || | |||| ||| ||| || || ||||| || | |||
Sbjct 4218899 GCGCAGGGCAGAGCCTCGGTCAGGAACTCCTGCTCGATCTCGACAGCGTCGACAATGATC 4218840
Query 127466 GCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACA-----G 127520
|| | | | ||| | || | ||| | | || |||| | ||| |
Sbjct 4218839 TTCTGGACAATCTCCTTGCTGGGGCGGTTGT-TGAGGTG----AGAGAACAACAAGCAAG 4218785
Query 127521 CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 127580
| || || |||||||||||||||||| |||||||| || || |||||| |||||| |
Sbjct 4218784 CGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAG 4218725
Query 127581 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 127640
|||| ||||| ||||||||||||||||| || | || | ||| ||||||||| |
Sbjct 4218724 GCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGCACCACTGAAGAAGATAC 4218665
Query 127641 CCTCCAC 127647
|||| ||
Sbjct 4218664 CCTCGAC 4218658
>seq3
Length=6663688
Score = 86.0 bits (94), Expect = 8e-12
Identities = 159/228 (70%), Gaps = 8/228 (4%)
Strand=Plus/Minus
Query 12882 GCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAA--AGA 12939
||||| || || |||||||| | ||| || || || | || || | || | |||
Sbjct 594438 GCGTCGATCTCATCAATGAAGATGATGCAGGGAGTGTTCTTGCGCGC--CGTCGAGAAGA 594381
Query 12940 TATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG--CGGCGGA 12997
||||||||||||| |||||| ||||| |||||||| || ||||| | || | || |
Sbjct 594380 GATCTCGCACTCTCGAGGCACCAACACCAACAAACATTTCAACAAACTCGGAACCGCTG- 594322
Query 12998 ACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCC 13057
||| | || |||||||||| || || || || | || || ||||| ||||| ||
Sbjct 594321 ACACT-GAAGAAGGGGACGCCAGACTCTCCGGCAGTAGCCTTTGCCAGGAGAGTCTTACC 594263
Query 13058 CGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105
|| || || || ||||| | ||| || || |||||| |||| ||
Sbjct 594262 AGTACCGGGAGGACCTGCGAGGATGGCGCCGCGAGGGATCTTGGCTCC 594215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507100305080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |