Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 122 1e-22 seq3 86.0 8e-12 >seq1 Length=8787864 Score = 122 bits (134), Expect = 1e-22 Identities = 284/427 (67%), Gaps = 20/427 (5%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| ||| | ||| ||| |||||||| Sbjct 4219074 GTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCAT 4219015 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345 || || || ||||| | ||| | | | |||| || | ||| Sbjct 4219014 GAAGTCGAAGGGGTTGGTGGAGCGGTAGACCTTCTCGTTG-----CCGAGGGCGACGAGC 4218960 Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405 ||||| || | |||| |||||||||||| ||| | |||||||| |||| || Sbjct 4218959 AGACGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGA 4218900 Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465 || || || || || | |||| ||| ||| || || ||||| || | ||| Sbjct 4218899 GCGCAGGGCAGAGCCTCGGTCAGGAACTCCTGCTCGATCTCGACAGCGTCGACAATGATC 4218840 Query 127466 GCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACA-----G 127520 || | | | ||| | || | ||| | | || |||| | ||| | Sbjct 4218839 TTCTGGACAATCTCCTTGCTGGGGCGGTTGT-TGAGGTG----AGAGAACAACAAGCAAG 4218785 Query 127521 CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 127580 | || || |||||||||||||||||| |||||||| || || |||||| |||||| | Sbjct 4218784 CGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAG 4218725 Query 127581 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 127640 |||| ||||| ||||||||||||||||| || | || | ||| ||||||||| | Sbjct 4218724 GCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGCACCACTGAAGAAGATAC 4218665 Query 127641 CCTCCAC 127647 |||| || Sbjct 4218664 CCTCGAC 4218658 >seq3 Length=6663688 Score = 86.0 bits (94), Expect = 8e-12 Identities = 159/228 (70%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 12882 GCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAA--AGA 12939 ||||| || || |||||||| | ||| || || || | || || | || | ||| Sbjct 594438 GCGTCGATCTCATCAATGAAGATGATGCAGGGAGTGTTCTTGCGCGC--CGTCGAGAAGA 594381 Query 12940 TATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG--CGGCGGA 12997 ||||||||||||| |||||| ||||| |||||||| || ||||| | || | || | Sbjct 594380 GATCTCGCACTCTCGAGGCACCAACACCAACAAACATTTCAACAAACTCGGAACCGCTG- 594322 Query 12998 ACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCC 13057 ||| | || |||||||||| || || || || | || || ||||| ||||| || Sbjct 594321 ACACT-GAAGAAGGGGACGCCAGACTCTCCGGCAGTAGCCTTTGCCAGGAGAGTCTTACC 594263 Query 13058 CGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105 || || || || ||||| | ||| || || |||||| |||| || Sbjct 594262 AGTACCGGGAGGACCTGCGAGGATGGCGCCGCGAGGGATCTTGGCTCC 594215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507100305080