Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1 158 1e-33
seq5 127 2e-24
seq6 111 2e-19
>seq1
Length=8787864
Score = 158 bits (174), Expect = 1e-33
Identities = 338/501 (67%), Gaps = 8/501 (2%)
Strand=Plus/Minus
Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663
||||| || || || || ||||| || || || || || || ||| ||| ||| |
Sbjct 4219079 TTTTGGTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTC 4219020
Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720
||| || || |||||||||| | | |||| ||| | |||||| || |||||
Sbjct 4219019 TCCATGAAGTCGAAGGGGTTGGTGGAGCGGTAGACCTTCTCGTTGCCGA---GGGCGACG 4218963
Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780
||||| | |||||| |||||||| ||||| ||| |||| | | | || | || |||
Sbjct 4218962 AGCAGACGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGC 4218903
Query 132781 AGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839
||| |||| ||||| || ||||| || || |||||||| |||| |||||| |
Sbjct 4218902 AGAGCGCAG-GGCAGAGCCTCGGTCAGGAACTCCTGCTCGATCTCGACAGCGTCGACAAT 4218844
Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGC 132899
||| | | || | || ||| || || | | || ||||| |||||||||
Sbjct 4218843 GATCTTCTGGACAATCTCCTTGCTGGGGCGGTTGTTGAGGTGAGAGAACAACAAGCAAGC 4218784
Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959
|||||| || | |||||||| | || ||||| |||||| ||| |||| || ||
Sbjct 4218783 GAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGG 4218724
Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019
||| || || || || || | ||| || |||| ||||||| || ||||||| ||
Sbjct 4218723 CATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGCACCACTGAAGAAGATACC 4218664
Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCA 133079
||||||||| || || || | || ||||| | || || | || | | | ||||||
Sbjct 4218663 CTCGACGGCAGCAAAGGCGATCAAGCGCTGAGCAAAGGTCGACTCCTCGTCAGTGATCCA 4218604
Query 133080 GCGCAGCGCCCATTCGGCCTT 133100
|| ||||| ||||||||
Sbjct 4218603 CTTGAGAGCCCAGTCGGCCTT 4218583
Score = 150 bits (166), Expect = 2e-31
Identities = 230/325 (71%), Gaps = 7/325 (2%)
Strand=Plus/Minus
Query 133120 GTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGA 133177
|| || |||||||| ||||| | || ||| || | ||| | | | |||||| ||||
Sbjct 4218508 GTCTCAATGGCGTTGAACAA--GTAGGTTCGCTGCTTAGGCTCCCTGATGTAGGTATCGA 4218451
Query 133178 TGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGC 133237
|||| ||| || | || ||||| | ||||||||| ||| || || ||||| ||||
Sbjct 4218450 TGAGCAGCGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGC 4218391
Query 133238 ACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGA 133297
| || |||||| | ||| || || ||||||||| ||||| || || |||||||
Sbjct 4218390 ATCGTGCCTCGGGGATCTGGACCTCGCCGCTGAAACGCTCAACCAGGTTCTCATTGACGA 4218331
Query 133298 TGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGT 133357
||||||| ||||||||| |||||||| | ||| |||||| | |||||| ||||
Sbjct 4218330 TGCCGTCAGAGGCGGCGAAGAAGGCCAGGATGTGGGAGATGAAGTATTGCTCGTCTTCGT 4218271
Query 133358 ---TCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAA 133414
|| | | ||||||| | ||||||||||| || | |||||| | ||||| |
Sbjct 4218270 TGATCTTGTTGTTCCAGTCGTGGAGATCCTTGGACAGATCAATCTCCTCAGCAGTCCAGA 4218211
Query 133415 ACGACGCCTCGGCTTTTTTGTACAT 133439
| || |||| || || ||||||||
Sbjct 4218210 AGGAAGCCTGAGCCTTCTTGTACAT 4218186
Score = 141 bits (156), Expect = 9e-29
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| || || || ||||| || || |||||| | || || ||| |
Sbjct 8578727 AAAATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACTATCACCCTTGAGGTGGAGTCT 8578668
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
|||||| | | | | | || || |||| ||||| |||||||||||| | |||
Sbjct 8578667 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGAC 8578608
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || || | ||| ||||| |||||||| || | |||||||| | |||||||
Sbjct 8578607 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGAGCGACTAC 8578548
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||||| ||||| |||| || || |||| |||||
Sbjct 8578547 AACATCCAGAAGGAGTCGACTCTTCACCTGGTCCTGCG 8578510
>seq5
Length=5891385
Score = 127 bits (140), Expect = 2e-24
Identities = 161/218 (74%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || |||||||| || |||||||| | || || ||| | |
Sbjct 1784680 ATGCAGATCTTTGTCAAGACCCTCACGGGAAAGACCATCACATTGGAAGTTGAGTCGTCG 1784739
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | |||| | |||| || || | ||||| |||||||| ||| | ||||
Sbjct 1784740 GACACAATCGACAACG--TGAAGAGCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACC 1784797
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| ||||| | || || || |||||||| |||| || ||||| |||||||
Sbjct 1784798 AGCAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGAACCCTGTCTGACTACA 1784857
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||||||| |||| ||||| |||||||| |||
Sbjct 1784858 ACATCCAAAAGGAGTCGACTCTGCACTTGGTGCTCCGT 1784895
Score = 89.7 bits (98), Expect = 5e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313
|||| || || ||||| || || ||||||||| |||| || || | |||||| | |
Sbjct 1784462 TCGTCAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAATCGTCCGACACCATCG 1784521
Query 38314 AAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCA 38373
| | | || || || | ||||| ||||| || ||| | || || ||||| || |
Sbjct 1784522 ACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGTCTGA 1784581
Query 38374 TTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGG 38433
||| ||| || || ||||| || || | |||||||| |||||||||||| || ||||
Sbjct 1784582 TTTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGG 1784641
Query 38434 AAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
| | || || || | || || ||| || | || ||
Sbjct 1784642 AGTCCACCCTCCACCTTGTCCTTCGTCTGCGTGGTGG 1784678
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| |||||||| | || |||||| || |
Sbjct 1784164 ATGCAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCG 1784223
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | | || || |||| ||||| || || |||||| | || ||
Sbjct 1784224 GATACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAG 1784283
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | || || || ||||| || || | || || ||| ||||||||||
Sbjct 1784284 CAGCGCCTGATCTTTGCCGGAAAGCAGCTCGAGGATGGTCGTACTCTCTCCGACTACAAC 1784343
Query 38424 ATCCAAAAGGA 38434
||||| |||||
Sbjct 1784344 ATCCAGAAGGA 1784354
>seq6
Length=3941639
Score = 111 bits (122), Expect = 2e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || |||||||| ||||||||| |||| || ||| | |||||| | |
Sbjct 189387 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATC 189328
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| ||||| || ||| | ||||| ||||| ||
Sbjct 189327 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTG 189268
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | ||| || || ||||| || || | |||||||| | ||||||||||||||| |||
Sbjct 189267 ATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAAG 189208
Query 38433 G 38433
|
Sbjct 189207 G 189207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172718721920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |