Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 158 1e-33 seq5 127 2e-24 seq6 111 2e-19 >seq1 Length=8787864 Score = 158 bits (174), Expect = 1e-33 Identities = 338/501 (67%), Gaps = 8/501 (2%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 ||||| || || || || ||||| || || || || || || ||| ||| ||| | Sbjct 4219079 TTTTGGTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTC 4219020 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720 ||| || || |||||||||| | | |||| ||| | |||||| || ||||| Sbjct 4219019 TCCATGAAGTCGAAGGGGTTGGTGGAGCGGTAGACCTTCTCGTTGCCGA---GGGCGACG 4218963 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 ||||| | |||||| |||||||| ||||| ||| |||| | | | || | || ||| Sbjct 4218962 AGCAGACGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGC 4218903 Query 132781 AGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839 ||| |||| ||||| || ||||| || || |||||||| |||| |||||| | Sbjct 4218902 AGAGCGCAG-GGCAGAGCCTCGGTCAGGAACTCCTGCTCGATCTCGACAGCGTCGACAAT 4218844 Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGC 132899 ||| | | || | || ||| || || | | || ||||| ||||||||| Sbjct 4218843 GATCTTCTGGACAATCTCCTTGCTGGGGCGGTTGTTGAGGTGAGAGAACAACAAGCAAGC 4218784 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959 |||||| || | |||||||| | || ||||| |||||| ||| |||| || || Sbjct 4218783 GAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGG 4218724 Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019 ||| || || || || || | ||| || |||| ||||||| || ||||||| || Sbjct 4218723 CATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGCACCACTGAAGAAGATACC 4218664 Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCA 133079 ||||||||| || || || | || ||||| | || || | || | | | |||||| Sbjct 4218663 CTCGACGGCAGCAAAGGCGATCAAGCGCTGAGCAAAGGTCGACTCCTCGTCAGTGATCCA 4218604 Query 133080 GCGCAGCGCCCATTCGGCCTT 133100 || ||||| |||||||| Sbjct 4218603 CTTGAGAGCCCAGTCGGCCTT 4218583 Score = 150 bits (166), Expect = 2e-31 Identities = 230/325 (71%), Gaps = 7/325 (2%) Strand=Plus/Minus Query 133120 GTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGA 133177 || || |||||||| ||||| | || ||| || | ||| | | | |||||| |||| Sbjct 4218508 GTCTCAATGGCGTTGAACAA--GTAGGTTCGCTGCTTAGGCTCCCTGATGTAGGTATCGA 4218451 Query 133178 TGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGC 133237 |||| ||| || | || ||||| | ||||||||| ||| || || ||||| |||| Sbjct 4218450 TGAGCAGCGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGC 4218391 Query 133238 ACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGA 133297 | || |||||| | ||| || || ||||||||| ||||| || || ||||||| Sbjct 4218390 ATCGTGCCTCGGGGATCTGGACCTCGCCGCTGAAACGCTCAACCAGGTTCTCATTGACGA 4218331 Query 133298 TGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGT 133357 ||||||| ||||||||| |||||||| | ||| |||||| | |||||| |||| Sbjct 4218330 TGCCGTCAGAGGCGGCGAAGAAGGCCAGGATGTGGGAGATGAAGTATTGCTCGTCTTCGT 4218271 Query 133358 ---TCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAA 133414 || | | ||||||| | ||||||||||| || | |||||| | ||||| | Sbjct 4218270 TGATCTTGTTGTTCCAGTCGTGGAGATCCTTGGACAGATCAATCTCCTCAGCAGTCCAGA 4218211 Query 133415 ACGACGCCTCGGCTTTTTTGTACAT 133439 | || |||| || || |||||||| Sbjct 4218210 AGGAAGCCTGAGCCTTCTTGTACAT 4218186 Score = 141 bits (156), Expect = 9e-29 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || ||||| || || || ||||| || || |||||| | || || ||| | Sbjct 8578727 AAAATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACTATCACCCTTGAGGTGGAGTCT 8578668 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||||| | | | | | || || |||| ||||| |||||||||||| | ||| Sbjct 8578667 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGAC 8578608 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| ||||| |||||||| || | |||||||| | ||||||| Sbjct 8578607 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGAGCGACTAC 8578548 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||| ||||| |||| || || |||| ||||| Sbjct 8578547 AACATCCAGAAGGAGTCGACTCTTCACCTGGTCCTGCG 8578510 >seq5 Length=5891385 Score = 127 bits (140), Expect = 2e-24 Identities = 161/218 (74%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || |||||||| || |||||||| | || || ||| | | Sbjct 1784680 ATGCAGATCTTTGTCAAGACCCTCACGGGAAAGACCATCACATTGGAAGTTGAGTCGTCG 1784739 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | |||| || || | ||||| |||||||| ||| | |||| Sbjct 1784740 GACACAATCGACAACG--TGAAGAGCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACC 1784797 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | || || || |||||||| |||| || ||||| ||||||| Sbjct 1784798 AGCAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGAACCCTGTCTGACTACA 1784857 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||||| |||| ||||| |||||||| ||| Sbjct 1784858 ACATCCAAAAGGAGTCGACTCTGCACTTGGTGCTCCGT 1784895 Score = 89.7 bits (98), Expect = 5e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313 |||| || || ||||| || || ||||||||| |||| || || | |||||| | | Sbjct 1784462 TCGTCAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAATCGTCCGACACCATCG 1784521 Query 38314 AAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCA 38373 | | | || || || | ||||| ||||| || ||| | || || ||||| || | Sbjct 1784522 ACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGTCTGA 1784581 Query 38374 TTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGG 38433 ||| ||| || || ||||| || || | |||||||| |||||||||||| || |||| Sbjct 1784582 TTTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGG 1784641 Query 38434 AAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | | || || || | || || ||| || | || || Sbjct 1784642 AGTCCACCCTCCACCTTGTCCTTCGTCTGCGTGGTGG 1784678 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| |||||||| | || |||||| || | Sbjct 1784164 ATGCAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCG 1784223 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || || |||| ||||| || || |||||| | || || Sbjct 1784224 GATACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAG 1784283 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || || || ||||| || || | || || ||| |||||||||| Sbjct 1784284 CAGCGCCTGATCTTTGCCGGAAAGCAGCTCGAGGATGGTCGTACTCTCTCCGACTACAAC 1784343 Query 38424 ATCCAAAAGGA 38434 ||||| ||||| Sbjct 1784344 ATCCAGAAGGA 1784354 >seq6 Length=3941639 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| |||| || ||| | |||||| | | Sbjct 189387 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATC 189328 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || ||| | ||||| ||||| || Sbjct 189327 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTG 189268 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || ||||| || || | |||||||| | ||||||||||||||| ||| Sbjct 189267 ATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAAG 189208 Query 38433 G 38433 | Sbjct 189207 G 189207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172718721920