Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3 194 2e-44 seq2 138 1e-27 seq5 134 2e-26 seq6 104 3e-17 >seq3 Length=6663688 Score = 194 bits (214), Expect = 2e-44 Identities = 413/614 (67%), Gaps = 6/614 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||| ||| || || || ||||| | ||||| || |||||||| Sbjct 6398808 TCGAAGTCCTCACCACCCAGGTGAGTGTCACCGGCGGTGGACTTGACCTCGAAGATACCC 6398867 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | || ||||| || |||||||||||||| || || || || ||| Sbjct 6398868 TCCTCAATGGTGAGGAGAGAGACATCGAAGGTACCACCACCCAGATCGAAGATCAGGACG 6398927 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| ||||||||||| || || || || || || || || Sbjct 6398928 TTGCGCTCGCCCTCGGCCTTCTTGTCGAGACCGTAGGCAATGGCAGCGGCGGTGGGCTCG 6398987 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || ||| ||||| | || | || || || || || || ||| Sbjct 6398988 TTGATGATACGGAGGACGTTGAGGCCGGAGATGAGACCGGCGTCCTTGGTGGCCTGACGT 6399047 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||| |||||||| ||||| || | ||| |||| || || | |||||| Sbjct 6399048 TGCGAGTCGTTGAAGTAGGCGGGGACGGTGATGACAGCGTTGGTAACGGTGCCACCGAGG 6399107 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | || ||| ||| | || | ||| || || ||||| || | | Sbjct 6399108 TAAGACTCGGCGGTCTCACGCATCTTGATCAGGATCATGGACGAGATCTCCTCGGGTGTG 6399167 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 || || | || || || | || || || | |||| || ||| || | | Sbjct 6399168 AAGGTCTTGCTCTCGCCCTTGTACTCGACCTCGACGTTGGGCTT-GCCG--GCCTTGTCG 6399224 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | |||||| | | | | ||||| || | || |||| || | ||||| | Sbjct 6399225 ACAACCTTGAAGGGGAAGTGCTTCATGTCAGCCTGAACCTCGGCATCAGCGAACTTGCGG 6399284 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || |||||||| || || || || ||||| || |||||||| || ||||||||| Sbjct 6399285 CCAATCAGACGCTTGGCGTCGAAGACCGTGTTGTTCGGGTTCATTGCGACTTGGTTCTTG 6399344 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || ||||| | || || | || || || |||||| |||| || || || Sbjct 6399345 GCAGCATCTCCGATCAATCGCTC---GGTGTCTGTGAAGGCGACGAACGAGGGAGTGGTG 6399401 Query 8057 CGATTCCCTTGGTC 8070 || || || ||||| Sbjct 6399402 CGGTTACCCTGGTC 6399415 >seq2 Length=7440894 Score = 138 bits (152), Expect = 1e-27 Identities = 245/354 (69%), Gaps = 5/354 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || | |||||||||||| || || || ||||| || ||||| |||| ||| Sbjct 5073697 TCGAAGTCCTGACCACCCAAGTGGGTGTCACCGGCGGTGGCCTTGACAGTGAAGACACCA 5073638 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || | ||||| | | || ||||| || ||||||||||| || || ||||||| ||| Sbjct 5073637 CCCTGGATGTTGAGGAGGGACACATCGAAGGTACCACCACCAAGATCGTAAATGAGGACG 5073578 Query 7577 TT-CGTATCGTC---GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 || || | || | |||| | | |||||||| || || || || || || || Sbjct 5073577 TTGCGCTCCTTCTCGGACTTTCCGGC-ACCAAGACCGTAGGCAATGGCAGCAGCGGTAGG 5073519 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || || || ||||| || |||||||||||| || | | ||||| || || || || Sbjct 5073518 CTCGTTGATGATACGCAGGACGTTCAGGCCAGCGATGGCACCAGCATCCTTGGTGGCCTG 5073459 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 || || ||||| |||||||| ||||| || | ||| || | | || ||||| || Sbjct 5073458 TCTCTGGTTGTCGTTGAAGTAGGCGGGGACAGTGATGACGGCCTTCTCAACCTTCTTGCC 5073399 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 || | | || || || || ||||| ||||| || ||||| | || ||||| Sbjct 5073398 AAGCTTGGTCTCGGCAATCTCCTTCATCTTGGTGAGGACCATGGCGGAGATCTC 5073345 >seq5 Length=5891385 Score = 134 bits (148), Expect = 2e-26 Identities = 247/358 (69%), Gaps = 13/358 (4%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | ||| || || || || || || || || |||| ||| Sbjct 2865937 TCGAAATCCTCACCACCAAGGTGAGTGTCACCAGCAGTAGCCAGAACCTCGAAGACACCC 2865878 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG---GTCAAAAATGA-G 7572 |||||| | || |||||||| || ||||||||||| || || | ||||| | Sbjct 2865877 TGGTCAATGGACAGCAGGGAAACATCGAAAGTACCACCACCAAGATCGTAGACAATGATG 2865818 Query 7573 T-ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTG 7631 | || || | |||| | |||| || |||||||| || || || ||||| || | Sbjct 2865817 TGGCGCTC--AGCGTC------GGTCTTGTCAAGACCGTAGGCAATGGCGGCCGCAGTGG 2865766 Query 7632 GTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 | || || | ||||| || ||| || |||||||| | | ||||| || || || | Sbjct 2865765 GCTCGTTGACGATACGGAGGACGTTGAGACCAGCAATGATACCGGCATCCTTGGTAGCCT 2865706 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 | || || | ||||| |||||||| ||||| || || || |||| ||||| ||||| | Sbjct 2865705 GGCGCTGAGCGTCGTTGAAGTAGGCAGGGACGGTAACAACGGCGTGGGTGACCTTCTTGC 2865646 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 | || || || || |||| || ||||| ||| ||||| | | || || ||||| Sbjct 2865645 CCAGGTAGGACTCGGCGACCTCCTTCATCTTGCCGAGAACGACGGCGGAGATTTCTTC 2865588 >seq6 Length=3941639 Score = 104 bits (114), Expect = 3e-17 Identities = 195/284 (69%), Gaps = 12/284 (4%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||||||||| || || || ||| | ||||| ||||||| ||| Sbjct 1182088 ATCGAAATCCTCACCACCCAAGTGGGTGTCACCGTTGGTAGACTTGACCTCAAAGACACC 1182029 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT---GAG 7572 | || | | | || | ||| || ||||||||||| || || | | || Sbjct 1182028 GTTCTGGATCTCCAGAACGGAGATATCGAAGGTACCACCACCAAGATCGTAGACAGCGAC 1181969 Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 ||| || ||| | || ||| || |||||||| |||| || || || || || Sbjct 1181968 AACG--CGG-TCGGCCTC------CTTCTCAAGACCGTAGGCGAGGGCAGCAGCAGTGGG 1181918 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || || | || ||| ||| ||||||||||| || | || || || || || || Sbjct 1181917 CTCGTTGACAACACGGAGAACGTTCAGGCCAGAGATCTGACCGGCGTCCTTGGTGGCCTG 1181858 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736 |||||||| ||||| |||||||| ||||| || ||||| |||| Sbjct 1181857 ACGTTGCGAGTCGTTGAAGTAGGCGGGGACGGTGACGACAGCGT 1181814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132696790920