Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq12 89.7 6e-13
>seq12
Length=253479
Score = 89.7 bits (98), Expect = 6e-13
Identities = 190/284 (67%), Gaps = 0/284 (0%)
Strand=Plus/Plus
Query 153732 GGTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGA 153791
|| || |||||| || || || | || ||| ||| |||| ||| | ||| | ||
Sbjct 213688 GGAGAATGGGGAGCCGACATCGCATTCGGCAGTGCCCAACGGTTCGGTGTCCCTCTTGGC 213747
Query 153792 TATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCT 153851
|| ||||| || ||||| ||||||||||| ||||| ||| | ||||| ||||| ||
Sbjct 213748 TACGGAGGACCCCATGCCGCATTCTTTGCTGTGACAGAGAAGCACAAGAGGAAGATTCCC 213807
Query 153852 GGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTA 153911
|| ||| | || || ||| || | ||| || || ||| | | || ||
Sbjct 213808 GGAAGACTCGTGGGCTTGTCCAAGGACCGCCTGGGTGGCAATGCTTACCGCCTGGCTCTC 213867
Query 153912 CAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAG 153971
|||||| | |||||||| || | |||| || || || |||||| | ||||| | |||
Sbjct 213868 CAGACTCGCGAGCAGCACATTCGACGAGAGAAGGCCACGAGTAACGTTTGCACTTCCCAG 213927
Query 153972 GCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGG 154015
|| || |||| || ||| || | || |||| || |||||
Sbjct 213928 GCCTTGTTGGCCAACATGAGTGCGCTTTACGCAGTGTACCATGG 213971
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 153201 AGTCTTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTT 153260
||||| || || || || ||||||| ||||||||||| || ||||| ||| |||||||
Sbjct 213127 AGTCTGATCGGCCATGGCTACTATGAGACCATTACACCGCCCGTCATTCAGAGAAACGTG 213186
Query 153261 CTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGA 153320
|| ||||| || |||||||| ||| || || ||||| | ||||| || |||
Sbjct 213187 CTCGAGAACCCGGCCTGGTACACCAGTTATACCCCTTATCAGCCCGAGATCAGCCAAGGA 213246
Query 153321 AGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATA 153380
| | || || | |||| | ||||| | |||| || || || | | || ||
Sbjct 213247 CGTCTCGAGTCTCTGGTCAACTTTCAAACCATGGTCACTGACCTCACCGCCCTGCCCATT 213306
Query 153381 GCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428
|| || || ||| || || |||| ||| ||||| || || || |||
Sbjct 213307 GCCAATGCCAGTCTTTTGGACGAAGGAACGGCAGCTGCCGAGGCCATG 213354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579212705877920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |