Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq5 138 3e-27 seq1 138 3e-27 >seq5 Length=5891385 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || |||||||| || || || ||||| |||| ||||| | ||||| ||| Sbjct 1784372 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCATCCTCG 1784313 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || || || || ||||||||||| ||||| || Sbjct 1784312 AGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGG 1784253 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || |||||||| ||||| || || ||||| || | ||||| Sbjct 1784252 ATCTTGGACTTGACATTGTCAATGGTATCCGAGGACTCGACCTCAAGAGTGATGGTCTTG 1784193 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 1784192 CCGGTAAGGGTCTTGACGAAGATCTGCAT 1784164 Score = 111 bits (122), Expect = 3e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||| ||||| ||||| || ||||| || | || |||| || || || ||||| Sbjct 1784883 GTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTTCGGCCGTCCTCCAGCTG 1784824 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || ||||| || || || ||||| || || || || || ||||| ||||| || Sbjct 1784823 CTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTT 1784764 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| ||||| || || |||||||| || ||||| | || | |||||||| || Sbjct 1784763 GCTCTTCACGTTGTCGATTGTGTCCGACGACTCAACTTCCAATGTGATGGTCTTTCCCGT 1784704 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 1784703 GAGGGTCTTGACAAAGATCTGCAT 1784680 >seq1 Length=8787864 Score = 138 bits (152), Expect = 3e-27 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||| ||||| || || || ||||| ||| || || | ||||| || Sbjct 8578516 ACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCC 8578575 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || ||||| || || ||||| || Sbjct 8578576 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 8578635 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || |||||||| ||| ||||| |||||||| | ||||| Sbjct 8578636 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTA 8578695 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || | || || ||||| | ||||||| Sbjct 8578696 CCCGTAAGGGTCTTGACGAAGATCTGCATTT 8578726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481415201971