Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq5 138 3e-27
seq1 138 3e-27
>seq5
Length=5891385
Score = 138 bits (152), Expect = 3e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| || |||||||| || || || ||||| |||| ||||| | ||||| |||
Sbjct 1784372 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCATCCTCG 1784313
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || || || || || || ||||||||||| ||||| ||
Sbjct 1784312 AGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGG 1784253
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || |||||||| ||||| || || ||||| || | |||||
Sbjct 1784252 ATCTTGGACTTGACATTGTCAATGGTATCCGAGGACTCGACCTCAAGAGTGATGGTCTTG 1784193
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 1784192 CCGGTAAGGGTCTTGACGAAGATCTGCAT 1784164
Score = 111 bits (122), Expect = 3e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||| ||||| ||||| || ||||| || | || |||| || || || |||||
Sbjct 1784883 GTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTTCGGCCGTCCTCCAGCTG 1784824
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| || ||||| || || || ||||| || || || || || ||||| ||||| ||
Sbjct 1784823 CTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTT 1784764
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| ||||| || || |||||||| || ||||| | || | |||||||| ||
Sbjct 1784763 GCTCTTCACGTTGTCGATTGTGTCCGACGACTCAACTTCCAATGTGATGGTCTTTCCCGT 1784704
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || || || | |||||
Sbjct 1784703 GAGGGTCTTGACAAAGATCTGCAT 1784680
>seq1
Length=8787864
Score = 138 bits (152), Expect = 3e-27
Identities = 157/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||||||||| ||||| || || || ||||| ||| || || | ||||| ||
Sbjct 8578516 ACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCC 8578575
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || ||||| || ||||| || || ||||| ||
Sbjct 8578576 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 8578635
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || || |||||||| ||| ||||| |||||||| | |||||
Sbjct 8578636 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTA 8578695
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
|| || | || || ||||| | |||||||
Sbjct 8578696 CCCGTAAGGGTCTTGACGAAGATCTGCATTT 8578726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481415201971
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |