Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq5 109 4e-19
>seq5
Length=5891385
Score = 109 bits (120), Expect = 4e-19
Identities = 154/214 (72%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || || || ||||| ||||| || ||| |||| | || |||
Sbjct 1784888 ACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTTCGGCCGTCCTCC 1784829
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || ||||| || || || |||||||| | || | ||||||||||| |
Sbjct 1784828 AGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGA 1784769
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948
||||| || || | | ||||| | ||| | |||||| || | || |||||
Sbjct 1784768 ATCTTGCTCTTCAC----GTTGTCGATTGTGTCCGACGACTCAACTTCCAATGTGATGGT 1784713
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||||||||| ||||| |||||||||||||||
Sbjct 1784712 CTTTCCCGTGAGGGTCTTGACAAAGATCTGCATA 1784679
Score = 89.7 bits (98), Expect = 3e-13
Identities = 131/183 (72%), Gaps = 8/183 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| ||||| || ||| | || |||| || ||||| |||||||| ||
Sbjct 1784642 TCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAA 1784583
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| || | || | ||||||||||| ||||||| ||||| ||
Sbjct 1784582 ATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGAC--AT 1784525
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| || | || || |||| ||| ||||| ||||| ||||| |||||
Sbjct 1784524 --TGTCGATGGTGTCGGACGATTCCACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTT 1784467
Query 34967 CAC 34969
||
Sbjct 1784466 GAC 1784464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633548565864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |