Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq6 131 1e-25
>seq6
Length=3941639
Score = 131 bits (144), Expect = 1e-25
Identities = 260/383 (68%), Gaps = 14/383 (4%)
Strand=Plus/Minus
Query 30008 TGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 30067
||||||| || || || ||||| || ||| |||||||||||||| || |||||
Sbjct 2631886 TGTGGCAGGGCGGCAGGGCCATCTTCTTCAGGTCGGCGGGGTTCCAGGCGCTCATGATGA 2631827
Query 30068 TGCGCCTGTCTTCTGGGTTGTTCCTGAT------GAGGTCCACGGCGTTTTGCAGCTGAT 30121
|||| | ||| | ||||| | | || || | || ||||| ||||| |
Sbjct 2631826 TGCGGCGGTCGTAGGGGTTCGTGCGGAGCTTGTGGATGACCTCGGCG------AGCTGGT 2631773
Query 30122 CCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCC 30181
| || ||| |||| |||||| | | |||| ||||||| || || || || | ||
Sbjct 2631772 CGACGCCCTGGCCCGTGTAGTCGGTGCGGGCGTCCTTGTACTCGGCGCCAAAGTGGCGCC 2631713
Query 30182 ACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGT 30241
||||||| ||||| || || |||||||| || | || | |||| | ||| ||
Sbjct 2631712 ACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACCTCGCGGTGCGACAGGCCGGCGCCGT 2631653
Query 30242 CCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTT 30301
| | || || | || |||||| ||||||||||||| || || |||||| |||
Sbjct 2631652 CGAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGCCGGCCTCGGACAGCGACA 2631593
Query 30302 TGGAGTTTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAG 30360
|| ||| ||||| || |||||||||||||||| ||||||||||||| |||
Sbjct 2631592 GCGACGACGTGCTGCCCTC-GATGAACCACAGCAGCTCCGCCACGACGGCCTTGAGGAAG 2631534
Query 30361 ACCCTCTTGGTCGTGAGGAGGGG 30383
|| | ||| ||||| || || ||
Sbjct 2631533 ACGCGCTTCGTCGTTAGCAGCGG 2631511
Score = 120 bits (132), Expect = 2e-22
Identities = 145/195 (74%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 29776 CTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCG 29835
|| ||||| | | |||||| | ||||| |||||||| || | ||||||||| |||
Sbjct 2632184 CTCGGCTCGCGCGTGAGCTGCTCCCGCAGCGCGTCCACGTGGTCGACGTAGACGTGCGCG 2632125
Query 29836 TCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTA 29894
|| |||| | ||| | || || ||||| | || || ||| |||| || |||||||
Sbjct 2632124 TCGCCCATGACGTGCGTCAGGCTG-CCCGGCACCAGGCCCGTGGCGTGCGCGATCATGTG 2632066
Query 29895 CGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCT 29954
||| || || | ||||||||| ||||| ||||| || || || |||||||| | ||||
Sbjct 2632065 CGTCAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCCAGGCCCATGTCGCAGGACCG 2632006
Query 29955 CTGGTAGAGCTGACA 29969
|||||||||||| ||
Sbjct 2632005 CTGGTAGAGCTGGCA 2631991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617535259649
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |