Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq5 109 4e-19 seq1 84.2 2e-11 >seq5 Length=5891385 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || || ||| ||||| || ||||| ||||| || |||| Sbjct 1784897 AGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTTCGG 1784838 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||| ||||||||| ||||| || || ||||| || |||| ||| | |||||| Sbjct 1784837 CCGTCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCC 1784778 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || || | | | || |||| ||| || |||| || Sbjct 1784777 TTGTCCTGAATCTTGCTCTTCACGTTGTCGATTGTGTCCGACGACTCAACTTCCAATGTG 1784718 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || |||||||| | || || ||||| |||||||| Sbjct 1784717 ATGGTCTTTCCCGTGAGGGTCTTGACAAAGATCTGCAT 1784680 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || || | ||||| || || || ||| || ||||| ||||||||| Sbjct 1785134 CCGCCACGGAGACGGAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCACTC 1785075 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || ||||||||||| || ||||| ||||| ||||| || |||| ||| Sbjct 1785074 AGGGTGCGGCCATCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 1785015 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||||| || || | | | ||||| | ||| || Sbjct 1785014 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCTGATGACTCGACT 1784955 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||||||| ||||| |||| || || || ||||||||||| Sbjct 1784954 TCCAGCGTAATCGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 1784908 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| ||| || ||||| ||||| || ||||| | || | || || | |||| Sbjct 1784654 TGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCCTCAAGCTGC 1784595 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 || ||||| || ||||| ||||| ||||||| ||| | |||||||||||| |||||| Sbjct 1784594 TTTCCGGCGAAAATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTT 1784536 >seq1 Length=8787864 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 9105 GTCCCCCTTATTCACGACAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTT 9164 ||| |||| |||| ||||||| | |||| || |||||||||| || || | Sbjct 1569753 GTCGCCCTCGCTCACCGCAAAGTCGGCGTCGCTGTGGTTGAACAGCAGTACCTTGACCTG 1569812 Query 9165 ACCCCTGTAATCCTCATCGATCACACCAGCACCCACGTCGATGAAGTGCTTGACCGCTAG 9224 |||| ||| || | ||||| || || || ||| |||||||||||||||| | || || Sbjct 1569813 GCCCCGGTAGTCGGCGTCGATGACGCCCGCGCCCGTGTCGATGAAGTGCTTGGCGGCCAG 1569872 Query 9225 TCCAGAGCGGGGCGCGATTCGACCGT 9250 || |||||||| ||||| || |||| Sbjct 1569873 GCCGGAGCGGGGGGCGATGCGGCCGT 1569898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937539645199