Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq5 109 4e-19
seq1 84.2 2e-11
>seq5
Length=5891385
Score = 109 bits (120), Expect = 4e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || || || ||| ||||| || ||||| ||||| || ||||
Sbjct 1784897 AGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTTCGG 1784838
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| |||| ||||||||| ||||| || || ||||| || |||| ||| | ||||||
Sbjct 1784837 CCGTCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCC 1784778
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || || | | | || |||| ||| || |||| ||
Sbjct 1784777 TTGTCCTGAATCTTGCTCTTCACGTTGTCGATTGTGTCCGACGACTCAACTTCCAATGTG 1784718
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || |||||||| | || || ||||| ||||||||
Sbjct 1784717 ATGGTCTTTCCCGTGAGGGTCTTGACAAAGATCTGCAT 1784680
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
||||| | || || | ||||| || || || ||| || ||||| |||||||||
Sbjct 1785134 CCGCCACGGAGACGGAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCACTC 1785075
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | || | || ||||||||||| || ||||| ||||| ||||| || |||| |||
Sbjct 1785074 AGGGTGCGGCCATCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 1785015
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| ||||||||||| ||||| || || | | | ||||| | ||| ||
Sbjct 1785014 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCTGATGACTCGACT 1784955
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|||| ||||||||| ||||| |||| || || || |||||||||||
Sbjct 1784954 TCCAGCGTAATCGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 1784908
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623
|| || ||| ||| || ||||| ||||| || ||||| | || | || || | ||||
Sbjct 1784654 TGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCCTCAAGCTGC 1784595
Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682
|| ||||| || ||||| ||||| ||||||| ||| | |||||||||||| ||||||
Sbjct 1784594 TTTCCGGCGAAAATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTT 1784536
>seq1
Length=8787864
Score = 84.2 bits (92), Expect = 2e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 9105 GTCCCCCTTATTCACGACAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTT 9164
||| |||| |||| ||||||| | |||| || |||||||||| || || |
Sbjct 1569753 GTCGCCCTCGCTCACCGCAAAGTCGGCGTCGCTGTGGTTGAACAGCAGTACCTTGACCTG 1569812
Query 9165 ACCCCTGTAATCCTCATCGATCACACCAGCACCCACGTCGATGAAGTGCTTGACCGCTAG 9224
|||| ||| || | ||||| || || || ||| |||||||||||||||| | || ||
Sbjct 1569813 GCCCCGGTAGTCGGCGTCGATGACGCCCGCGCCCGTGTCGATGAAGTGCTTGGCGGCCAG 1569872
Query 9225 TCCAGAGCGGGGCGCGATTCGACCGT 9250
|| |||||||| ||||| || ||||
Sbjct 1569873 GCCGGAGCGGGGGGCGATGCGGCCGT 1569898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937539645199
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |