Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3 338 1e-87 seq1 156 8e-33 >seq3 Length=6663688 Score = 338 bits (374), Expect = 1e-87 Identities = 984/1476 (67%), Gaps = 53/1476 (4%) Strand=Plus/Minus Query 221416 CGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT-TGGCCTCGG 221474 |||||||||||||||||| |||||||| |||||| ||||||||| || | ||||||||| Sbjct 2589389 CGTCAGGGCAGCGTGGTACATGGTCTCGAAGATCTGCTTGTTGAG-CTGTCTGGCCTCGG 2589331 Query 221475 GAGAAGTGAAGGGCATACGCAGCATCT-GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 | || |||||||| ||||| | ||||| |||| || || ||||| || |||| | Sbjct 2589330 GCGACTCAAAGGGCATGCGCAGAGCCAAGAAAG-CGTCAGCAAGACCCTGGACACCGACA 2589272 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 |||||||| | ||| | | ||||| | ||| | || ||| ||||| || ||||| Sbjct 2589271 CCGATGGGGCGGTGGCGCATGTTGCTGTTGCGTGC-CTCCTGA-ACGGGGTAGTGGTTGA 2589214 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 | ||||| | ||||| ||||| || || ||| | |||||| |||||||||| Sbjct 2589213 CATCGATGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACCTCGTGCAGCTTCTGGA 2589154 Query 221652 GATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711 | || || | ||| || || | || || |||||| || || | | Sbjct 2589153 AGT----CAT-AAGTGCCCGA-GTTGTAG------TCGACGAAAGCGGGCAGAGCCAAGG 2589106 Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTGTACA 221769 ||||||||| || ||||| |||||||| | || | |||| |||||||| || || Sbjct 2589105 AGGCCAGGTTGCAGACGGCGACCTCGTCA--GGTGCCGAGTACTCAATGATCTCAGTGCA 2589048 Query 221770 GAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTC 221829 |||||| || || || || |||| || || || |||||| |||||| ||| Sbjct 2589047 CAGGTTGGAGCTGCGAATAGTTCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCATGGTC 2588988 Query 221830 CTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG 221889 |||||||||||| ||||| |||||||| ||||||| | ||||| | |||||| Sbjct 2588987 CTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATGGCATACCAGAG 2588928 Query 221890 TTCTCTG-GCGCTCACCGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATACCCGGTATAG 221947 | |||| || || | ||| | ||| | ||||||| || | | | || || || Sbjct 2588927 CT-TCTGTGCCCTGATAGTCTTGC-GACCACGGCCCTCGGCCTCGTACTTCTCG-TACAG 2588871 Query 221948 AGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATC 222007 || | | |||| || ||||| ||| | ||||| || ||| | ||| |||||| Sbjct 2588870 GGCCT--CGAACTCATCGCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATC 2588813 Query 222008 AGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCC 222067 || |||||| ||| | | ||| | || |||||||||||| || ||||| || ||| Sbjct 2588812 AGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCC 2588753 Query 222068 TGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAAC 222127 | || || || | || || ||||||| |||| ||| || | || || | ||| Sbjct 2588752 AGGAACAGGTCACGGGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAAC 2588693 Query 222128 TCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTG 222187 || || | || | |||||| ||||| || |||| ||| | || || || ||||||||| Sbjct 2588692 TCGAAGACATCCGAGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTG 2588633 Query 222188 CCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCC 222246 |||||||| || || || ||| | |||||||| ||||| | || || | || Sbjct 2588632 CCACCCTGGTCGACGTATCT-GGCAGTGTTGTTGAAGACACGAAGCATGGGCACGATACC 2588574 Query 222247 GTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGA 222306 |||||| |||||||| || |||||| | || ||| | | | ||| Sbjct 2588573 GTTGGAGGTTCCGTTGGTTCCGGCAATGTAAGATCCAGTGGCACGGATGCGGTGGGCGTT 2588514 Query 222307 CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGAT 222366 | ||||| |||||||| || ||||||||||||||| ||||||| ||||| ||| Sbjct 2588513 GAGACCGATTCCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGAT 2588454 Query 222367 GCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGT 222426 ||||| || ||| ||||| | || | ||| || ||||| || | ||||| | || Sbjct 2588453 ACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCAAGAAGAGAGCTGAGCCTGGGG 2588394 Query 222427 GGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATC 222486 | | |||||| || || ||||| ||||||||| ||| | | ||||| | Sbjct 2588393 AGTGCCGGCGTTGAAGAGGGTGGGGGAGGCGTGTGTGAAGAACTTCTGGGACATGTAGTT 2588334 Query 222487 GTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTCATGT 222545 ||| ||||| | ||| | ||| | || ||| || | | | || | |||| Sbjct 2588333 GTAGGTCTCAATGACCTTCTCGACATCATCGCCCCAGATACCG-ACAGCAACACGCATGA 2588275 Query 222546 ACATGTACTGGGGCCTCTC--CACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTC 222603 ||||| ||| || ||||| || || | || || | || ||||| ||| || Sbjct 2588274 TCATGTGCTGAGGTCTCTCGGCAATCTTGCCGTTGATCTTCA-AG-AGGTAGGATCGCTC 2588217 Query 222604 CAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTC 222663 |||||||||||| |||||||| | | || ||||| | ||| || | ||| | ||| Sbjct 2588216 CAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGATCGTAGACAATGGCCGAGTC 2588157 Query 222664 CAGCTCCGACTTGTGCTTTACGCTCAACTCGAAAAAGCGCT---CAGACACGAGGGGAGC 222720 |||||| ||||||||| | | |||||| | ||| || || | || ||| Sbjct 2588156 CAGCTCTTCCTTGTGCTTCATGACAAACTCGTATGTCTGCTTGGCAATCATG-GGCGAG- 2588099 Query 222721 GTTCTCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAAC-- 222778 | | || ||| | | |||||| || | ||| ||||| | || || || | || || Sbjct 2588098 GGTGTC-TTGTTCTTGGGGTTGACATAGTGATACAGAT--CA-TTGACAACCGACGACCA 2588043 Query 222779 --GTGTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCAT 222836 | || | ||||||||||| || || ||||| ||||| || | || | ||| | | Sbjct 2588042 TTGCTTCTTG-GTCTGCTTGTGAAGGTTGGACACTGCGATACGTGCAGCGAGGATGGCGT 2587984 Query 222837 AGTCAGGGTGCACGGTGGTCATGCTGGCTAGGGTCT 222872 |||| ||||| | ||||||| ||| ||||| Sbjct 2587983 AGTCTGGGTGGGTGACGGTCATGTAGGCGGCGGTCT 2587948 Score = 84.2 bits (92), Expect = 4e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 221155 GTACAGGTTAGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCT 221214 ||| | ||| || ||| | || |||| || ||||||||||||||| ||||| | || Sbjct 2589644 GTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAGGTAGA 2589585 Query 221215 GGCGGTGGGCATGGGTGCCACCAGCAGACTGTTGCG 221250 ||| || |||||||| |||| ||||||||||||||| Sbjct 2589584 GGCAGTAGGCATGGGAGCCAACAGCAGACTGTTGCG 2589549 >seq1 Length=8787864 Score = 156 bits (172), Expect = 8e-33 Identities = 330/494 (67%), Gaps = 13/494 (3%) Strand=Plus/Plus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 ||||| | |||||||||| | || | || |||| |||| || | |||||| Sbjct 4218592 TGGGCTCTCAAGTGGATCACTGACGAGGAGTCGACCTTTGCTCAGCGCTTGATCGCCTTT 4218651 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 ||||| || ||||| ||||| ||||| ||| | || || ||||||||||| | ||| || Sbjct 4218652 GCTGCCGTCGAGGGTATCTTCTTCAGTGGTGCTTTCGCCTCCATCTTCTGGTTGAAGAAG 4218711 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 || ||||| || ||| ||| ||||||||||||||| | |||||||||||| Sbjct 4218712 CGTGGTCTGATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTC 4218771 Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA--ACCTTCTCAA- 26070 |||| || || || ||| || | | | | ||| ||| |||| || ||| Sbjct 4218772 CACACCGACTTCGCTTGCTTGTTGTTCTC---TCAC---CTCAACAACCGCCCCAGCAAG 4218825 Query 26071 GAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNN 26130 |||| ||| | | ||||| || ||||| ||||||||| ||||||| | Sbjct 4218826 GAGATTGTCCAGAAGATCATTGTCGACGCTGTCGAGATCGAGCAGGAGTTCCTGACCGAG 4218885 Query 26131 NNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTAT 26190 | ||||||||| || ||||||| || |||||||||| Sbjct 4218886 GCTCTGCCCTGCGCTCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACATTGAGTTC 4218945 Query 26191 GTGGCCGACCATCTGCT-GT-GCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACC 26248 || ||||||| |||||| || ||| || || || | ||||| | | | |||| Sbjct 4218946 GTCGCCGACCGTCTGCTCGTCGCC--CTCGGCAACGAGAAGGTCTACCGCTCCACCAACC 4219003 Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308 | |||||||| ||||| ||||| || ||| || |||||||||||||| || ||| | | Sbjct 4219004 CCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGCG 4219063 Query 26309 TCGGCGACTATCAA 26322 |||| ||||| ||| Sbjct 4219064 TCGGTGACTACCAA 4219077 Score = 104 bits (114), Expect = 4e-17 Identities = 164/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | ||||||||||||||||| || |||||| || || |||||||||||| Sbjct 4218177 ATCTGGCAAATGTACAAGAAGGCTCAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTG 4218236 Query 25537 GCCAAGGACATGGACGGCTGGTAC-GCTCTATC--CAAAGACGAGCAGCATTTTCTCAAG 25593 ||||||| | ||| |||| || | ||| | |||||||||| | || || Sbjct 4218237 TCCAAGGATCTCCACGACTGGAACAACAAGATCAACGAAGACGAGCAATACTTCATCTCC 4218296 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | |||| ||||| || |||||||| || || || || ||||| ||| ||| | Sbjct 4218297 CACATCCTGGCCTTCTTCGCCGCCTCTGACGGCATCGTCAATGAGAACCTGGTTGAGCGT 4218356 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | | || || ||| | ||||| || ||||||||||||||||| Sbjct 4218357 TTCAGCGGCGAGGTCCAGATCCCCGAGGCACGATGCTTCTACGGTTTCCAGAT 4218409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844649062720