Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq12 100 3e-16
>seq12
Length=253479
Score = 100 bits (110), Expect = 3e-16
Identities = 195/287 (68%), Gaps = 6/287 (2%)
Strand=Plus/Minus
Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331
||||| || |||| || | || ||| || || | || || || | ||||| | |
Sbjct 213971 CCATGGTACACTGCGTAAAGCGCACTCATGTTGGCCAACAAGGCCTGGGAAGTGCAAACG 213912
Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391
||||| || || || |||| || ||| |||||||| | ||| || || || | | |||
Sbjct 213911 TTACTCGTGGCCTTCTCTCGTCGAATGTGCTGCTCGCGAGTCTGGAGAGCCAGGCGGTAA 213852
Query 139392 GCAGGATTGCCTTC---GCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTC 139448
||| ||||| | || |||| ||| || || | ||| || || ||||| |||
Sbjct 213851 GCA---TTGCCACCCAGGCGGTCCTTGGACAAGCCCACGAGTCTTCCGGGAATCTTCCTC 213795
Query 139449 TTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATA 139508
|| | ||| ||||| ||||||||||| ||||| || |||||||| || | ||| | |
Sbjct 213794 TTGTGCTTCTCTGTCACAGCAAAGAATGCGGCATGGGGTCCTCCGTAGCCAAGAGGGACA 213735
Query 139509 CCAAACCTTTGCATACTACCTACAGCAATATCAAATCCCCACTCACC 139555
|| |||| ||| ||| || | || || || |||||| || ||
Sbjct 213734 CCGAACCGTTGGGCACTGCCGAATGCGATGTCGGCTCCCCATTCTCC 213688
Score = 91.5 bits (100), Expect = 2e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
||| ||||| || ||||| ||| |||| || || ||| || || || || || | |
Sbjct 213354 CATGGCCTCGGCAGCTGCCGTTCCTTCGTCCAAAAGACTGGCATTGGCAATGGGCAGGGC 213295
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
|| || || |||| | ||||| | |||| | || || | | ||| || ||
Sbjct 213294 GGTGAGGTCAGTGACCATGGTTTGAAAGTTGACCAGAGACTCGAGACGTCCTTGGCTGAT 213235
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038
||| | ||||| || || ||| |||||||| || ||||| || ||||||| |||
Sbjct 213234 CTCGGGCTGATAAGGGGTATAACTGGTGTACCAGGCCGGGTTCTCGAGCACGTTTCTCTG 213175
Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTATAAGACT 140086
||||| || ||||||||||| ||||||| || || || || |||||
Sbjct 213174 AATGACGGGCGGTGTAATGGTCTCATAGTAGCCATGGCCGATCAGACT 213127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578998305912760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |