Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 4e-15 seq1 84.2 3e-11 >seq3 Length=6663688 Score = 96.9 bits (106), Expect = 4e-15 Identities = 159/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || ||||||||||| || |||||| | ||||| ||| || ||||| || ||||| ||| Sbjct 594215 GGAGCCAAGATCCCTCGCGGCGCCATCCTCGCAGGTCCTCCCGGTACTGGTAAGACTCTC 594274 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CAA 175393 || || || | || || || || ||||| ||| || |||| || || | | Sbjct 594275 CTGGCAAAGGCTACTGCCGGAGAGTCTGGCGTCCCCTTCTTC-AGTG-TCAGCGGTTCCG 594332 Query 175394 ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCG 175453 | ||||| || |||||||||||||| |||||| || || || |||||||| | | Sbjct 594333 AGTTTGTTGAAATGTTTGTTGGTGTTGGTGCCTCGAGAGTGCGAGATCTCTTCTCGACGG 594392 Query 175454 CCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 | ||| | || || || || |||||||||||||||| || || Sbjct 594393 CGCGCAAGAACACTCCCTGCATCATCTTCATTGATGAGATCGACGC 594438 >seq1 Length=8787864 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| || ||||| | | || ||||| || ||||||||||||||| || | | Sbjct 4218626 CCTTTGCTCAGCGCTTGATCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGTGGTGCTT 4218685 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || | | || | |||||||||||||| ||||| ||||| || || |||||| || | Sbjct 4218686 TCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCTGGTCTGACCTTCTCCAACG 4218745 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCAC 65217 | || || || || || |||||||||||| Sbjct 4218746 AGCTCATCTCTCGTGACGAGGGTCTCCAC 4218774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569503057440