Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq3 96.9 4e-15
seq1 84.2 3e-11
>seq3
Length=6663688
Score = 96.9 bits (106), Expect = 4e-15
Identities = 159/226 (70%), Gaps = 4/226 (2%)
Strand=Plus/Plus
Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335
|| ||||||||||| || |||||| | ||||| ||| || ||||| || ||||| |||
Sbjct 594215 GGAGCCAAGATCCCTCGCGGCGCCATCCTCGCAGGTCCTCCCGGTACTGGTAAGACTCTC 594274
Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CAA 175393
|| || || | || || || || ||||| ||| || |||| || || | |
Sbjct 594275 CTGGCAAAGGCTACTGCCGGAGAGTCTGGCGTCCCCTTCTTC-AGTG-TCAGCGGTTCCG 594332
Query 175394 ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCG 175453
| ||||| || |||||||||||||| |||||| || || || |||||||| | |
Sbjct 594333 AGTTTGTTGAAATGTTTGTTGGTGTTGGTGCCTCGAGAGTGCGAGATCTCTTCTCGACGG 594392
Query 175454 CCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499
| ||| | || || || || |||||||||||||||| || ||
Sbjct 594393 CGCGCAAGAACACTCCCTGCATCATCTTCATTGATGAGATCGACGC 594438
>seq1
Length=8787864
Score = 84.2 bits (92), Expect = 3e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
|||| || ||||| | | || ||||| || ||||||||||||||| || | |
Sbjct 4218626 CCTTTGCTCAGCGCTTGATCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGTGGTGCTT 4218685
Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188
|| | | || | |||||||||||||| ||||| ||||| || || |||||| || |
Sbjct 4218686 TCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCTGGTCTGACCTTCTCCAACG 4218745
Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCAC 65217
| || || || || || ||||||||||||
Sbjct 4218746 AGCTCATCTCTCGTGACGAGGGTCTCCAC 4218774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569503057440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |