Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq2 131 5e-25
seq4 98.7 3e-15
>seq2
Length=7440894
Score = 131 bits (144), Expect = 5e-25
Identities = 176/245 (72%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631
||||| | | ||||| | ||| ||||| || ||||||||| | ||| || |||||
Sbjct 3829742 TCTTCAAGAGCCTTGACCAGACGTCGCTGGATGTAACCAGTTTCTGCTGTCTTGACAGCG 3829801
Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691
||||| || | ||| |||||||| |||| || |||||||| | ||| || ||
Sbjct 3829802 GTATCGATCAAACCTTCACGACCAGCCATGGCGTGGAAGAAGAACTCGGAAGGAGTCAGA 3829861
Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751
|| | | | | ||| |||| | ||| ||||| |||||||| || | |||| ||||||
Sbjct 3829862 CCTCGCAGATACGAGTTCTCGATGAAGCCACGAGCCTCGGGTGAGTAGTCGTCCTTGGTG 3829921
Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811
||||| ||||| || | || || | | || | || ||||||||||| || ||| |||||
Sbjct 3829922 AAGTGAGGCAGAGTGCGGTACTTAAAACCAAACGGAATACGCTTTCCTTCGACGATCTGC 3829981
Query 302812 TGTCC 302816
|| ||
Sbjct 3829982 TGACC 3829986
>seq4
Length=6441926
Score = 98.7 bits (108), Expect = 3e-15
Identities = 380/589 (65%), Gaps = 16/589 (3%)
Strand=Plus/Plus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| |||||||| | | ||| || ||||| ||| | || || || | || | | ||
Sbjct 6244478 ATCAGACCACAGATCTCACAGACGTGGACTCTGAATGCGTCCGACACCTCGAACAATCGC 6244537
Query 251467 CCCTTGGTGAA-GCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525
|||| ||| ||| | ||||| |||| ||||||||||||||||||||| || |||||
Sbjct 6244538 TCCTTCAAGAAAGCG-GCCGCACCATGTGCAATCATACAATCACGCTCCATCTCTCCGAA 6244596
Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGG 251585
|| |||||||| || ||||| | ||||||| | ||||| || || | | | ||
Sbjct 6244597 TCGGAGACCACCGTCACGAGCACGACCCTCGACGGGCTGGCGCGTCATGATCTGGACTGG 6244656
Query 251586 ACCGATGGAG--CGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAAT 251643
||| | ||| || || ||| |||| ||||| || ||| ||||||||| |
Sbjct 6244657 ACC--TCGAGCACGAGCGTGGATCTTGTCATCCACCATGTGACGGAGGCGCTGGTAGTAC 6244714
Query 251644 GCGGGACCGATGAAGATGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACT 251703
| || || | ||||| || ||| | ||||| | ||| ||||| | |
Sbjct 6244715 GTAGGGCCAAAGAAGACCTGAGACCGCAGCTTACGACCAGTGTGTCCGTGGTACATGATT 6244774
Query 251704 TCGTTTCCATTAGATTCATAACCAAGTTTCTGTAGC---TCTGAAGCAATATCACCAATC 251760
||| ||| ||||| |||||| | | ||||| |||| | || ||| |
Sbjct 6244775 TCGAATCCTCGAGATTGGTAACCATGCTCACGTAGCAGAGCTGACACGGAAT---CAACC 6244831
Query 251761 TTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAA--TCAACACTTTGC 251818
||| | | | ||| || |||| || | | |||| || || | | || || |
Sbjct 6244832 GTGACATCGGTGAAAGGAGTCGCGTCACCTTCCATACCC--TTCAAGGTGGAGACCTTAC 6244889
Query 251819 CTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGA 251878
| || ||| || ||||| || ||||||||| ||||| || || || ||||
Sbjct 6244890 TGAGGAGACACTCGACCAAATGGGCAATGGTCATACGAGAAGGAATGGCGTGAGGGTTGA 6244949
Query 251879 TGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAATGT 251938
| ||||| ||||| | || || | |||| |||||||||| || | | ||
Sbjct 6244950 TAATGATATCGGGAACGACACCCTCGCGACTGAACGGCATATCCTCTTGACGGAAAGTGA 6245009
Query 251939 TTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
||||| || ||||| || ||||| ||||| ||||| ||||||||
Sbjct 6245010 CACCAATGGTACCCTTCTGACCGTGGCGAGACGCAAACTTGTCACCAAT 6245058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817354850381
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |