Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 131 5e-25 seq4 98.7 3e-15 >seq2 Length=7440894 Score = 131 bits (144), Expect = 5e-25 Identities = 176/245 (72%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||| | | ||||| | ||| ||||| || ||||||||| | ||| || ||||| Sbjct 3829742 TCTTCAAGAGCCTTGACCAGACGTCGCTGGATGTAACCAGTTTCTGCTGTCTTGACAGCG 3829801 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 ||||| || | ||| |||||||| |||| || |||||||| | ||| || || Sbjct 3829802 GTATCGATCAAACCTTCACGACCAGCCATGGCGTGGAAGAAGAACTCGGAAGGAGTCAGA 3829861 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751 || | | | | ||| |||| | ||| ||||| |||||||| || | |||| |||||| Sbjct 3829862 CCTCGCAGATACGAGTTCTCGATGAAGCCACGAGCCTCGGGTGAGTAGTCGTCCTTGGTG 3829921 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 ||||| ||||| || | || || | | || | || ||||||||||| || ||| ||||| Sbjct 3829922 AAGTGAGGCAGAGTGCGGTACTTAAAACCAAACGGAATACGCTTTCCTTCGACGATCTGC 3829981 Query 302812 TGTCC 302816 || || Sbjct 3829982 TGACC 3829986 >seq4 Length=6441926 Score = 98.7 bits (108), Expect = 3e-15 Identities = 380/589 (65%), Gaps = 16/589 (3%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || |||||||| | | ||| || ||||| ||| | || || || | || | | || Sbjct 6244478 ATCAGACCACAGATCTCACAGACGTGGACTCTGAATGCGTCCGACACCTCGAACAATCGC 6244537 Query 251467 CCCTTGGTGAA-GCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525 |||| ||| ||| | ||||| |||| ||||||||||||||||||||| || ||||| Sbjct 6244538 TCCTTCAAGAAAGCG-GCCGCACCATGTGCAATCATACAATCACGCTCCATCTCTCCGAA 6244596 Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGG 251585 || |||||||| || ||||| | ||||||| | ||||| || || | | | || Sbjct 6244597 TCGGAGACCACCGTCACGAGCACGACCCTCGACGGGCTGGCGCGTCATGATCTGGACTGG 6244656 Query 251586 ACCGATGGAG--CGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAAT 251643 ||| | ||| || || ||| |||| ||||| || ||| ||||||||| | Sbjct 6244657 ACC--TCGAGCACGAGCGTGGATCTTGTCATCCACCATGTGACGGAGGCGCTGGTAGTAC 6244714 Query 251644 GCGGGACCGATGAAGATGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACT 251703 | || || | ||||| || ||| | ||||| | ||| ||||| | | Sbjct 6244715 GTAGGGCCAAAGAAGACCTGAGACCGCAGCTTACGACCAGTGTGTCCGTGGTACATGATT 6244774 Query 251704 TCGTTTCCATTAGATTCATAACCAAGTTTCTGTAGC---TCTGAAGCAATATCACCAATC 251760 ||| ||| ||||| |||||| | | ||||| |||| | || ||| | Sbjct 6244775 TCGAATCCTCGAGATTGGTAACCATGCTCACGTAGCAGAGCTGACACGGAAT---CAACC 6244831 Query 251761 TTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAA--TCAACACTTTGC 251818 ||| | | | ||| || |||| || | | |||| || || | | || || | Sbjct 6244832 GTGACATCGGTGAAAGGAGTCGCGTCACCTTCCATACCC--TTCAAGGTGGAGACCTTAC 6244889 Query 251819 CTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGA 251878 | || ||| || ||||| || ||||||||| ||||| || || || |||| Sbjct 6244890 TGAGGAGACACTCGACCAAATGGGCAATGGTCATACGAGAAGGAATGGCGTGAGGGTTGA 6244949 Query 251879 TGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAATGT 251938 | ||||| ||||| | || || | |||| |||||||||| || | | || Sbjct 6244950 TAATGATATCGGGAACGACACCCTCGCGACTGAACGGCATATCCTCTTGACGGAAAGTGA 6245009 Query 251939 TTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||| || ||||| || ||||| ||||| ||||| |||||||| Sbjct 6245010 CACCAATGGTACCCTTCTGACCGTGGCGAGACGCAAACTTGTCACCAAT 6245058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817354850381