Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3 147 2e-30 seq5 122 8e-23 seq1 104 2e-17 >seq3 Length=6663688 Score = 147 bits (162), Expect = 2e-30 Identities = 973/1541 (63%), Gaps = 71/1541 (5%) Strand=Plus/Minus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | |||||| || ||||| ||||| || || || ||| |||||| |||| | || Sbjct 2589683 GTTGACGACCTGGAACTCACCAGCCAACACACGGCGGGAGTAGATGTTGGAGGTGTAGGG 2589624 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||| || | |||||||| ||||||||||| | || | || || |||||| |||| Sbjct 2589623 CTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAGGTAGAGGCAGTAGGCATGGGAGCCAA 2589564 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 || ||| || || | |||||| ||||||| | |||| | ||| ||||||||| Sbjct 2589563 CAGCAGACTGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTCAAAGACTCCCAGTCCCA 2589504 Query 138681 CAAATCGCTAGGTTT---TTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGG 138737 | || | || | | |||||||| || ||||| | || || | |||| Sbjct 2589503 AAGGTCAGTGGGAGTAACGTCCTTCCACATGTCATACTGGAGGATGCCTTGAGAGACGGG 2589444 Query 138738 ACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTC---GCCTC 138794 ||| ||||| | ||| || ||| | || | ||| || ||| Sbjct 2589443 CGAGCCCTCGTAGGTGGAGTAAGGTCCCTCCTCCTTGGCAA---TGTTCATCGAGGCCGT 2589387 Query 138795 GAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCT 138854 || ||| | | ||| || || ||| ||||||| |||||| || |||||||| Sbjct 2589386 CAGGGCAGCGTGGTACATGGTCTCGAAGATCTGCTTGTTGAGCTGTCTGGCCTCGGGCGA 2589327 Query 138855 CTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGAC 138914 ||| | |||||||| || | ||| ||||| || || || || || || || |||| Sbjct 2589326 CTCAAAGGGCATGCGCAGAGCCAAGAAAGCGTCAGCAAGACCCTGGACACCGACACCGAT 2589267 Query 138915 AGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTC---GATAGGATAATAGTTTACAT 138970 ||||| ||||||| || ||| ||||| || || | || || | ||| |||| Sbjct 2589266 GGGGCGGTGGCGCA----TGTTGCTGTTGCGTGCCTCCTGAACGGGGTAGTGGTTGACAT 2589211 Query 138971 CGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAA 139029 ||||||| ||||| | || || ||||| |||| || | | | | | | | || Sbjct 2589210 CGATGATCTTGTTCAGGTTGCGAACGACGACCTGGGT-GACCTCGTGCAGCTTCTGGAAG 2589152 Query 139030 TCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCT 139089 || || |||||| ||||| |||||||| || | || ||| ||||| Sbjct 2589151 TCATAAGTGCCCGAGTTGTAGTCGACGA-------AAGCGGGCAGAGCCAA--GGAGGCC 2589101 Query 139090 ATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTA 139149 | |||||| || || || ||||| || | ||| || | || || | |||| || Sbjct 2589100 AGGTTGCAGACGGCGACCTCGTCAGGTGCCGAGTACTCAATGATCTCAGTGCACAGGTTG 2589041 Query 139150 CTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAA 139209 | || || || | || | || ||||| || ||||| | || ||||| Sbjct 2589040 GAGCTGCGAATAGTTCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCATGGTCCTTGTAG 2588981 Query 139210 AGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATG---AATTTGAAC--AAGT 139264 ||||| | || | ||||| || || | ||| | |||| | || | || Sbjct 2588980 AGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATGGCATACCAGAGCTTCTGT 2588921 Query 139265 CCCTAGCTTGTATT-TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCG 139323 || | | || || ||| ||| | | ||| ||||||||| ||||| || | Sbjct 2588920 GCCCTGATAGTCTTGCGAC-CAC-----GGCCCTCGGCCTCGTACTTCTCGTACAGGGCC 2588867 Query 139324 TCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGAC 139383 ||||| || |||||| ||| | || | | |||| || || ||||| || | | Sbjct 2588866 TCGAACTCATCGCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGGGTC 2588807 Query 139384 CATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGC---GAAC 139440 || | |||||| || ||| ||| ||||||| || || |||||||| | || |||| Sbjct 2588806 CAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAAC 2588747 Query 139441 AGCAAATCGCGCGC---CTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGA 139495 || | || |||| | || | ||||| || | | || | | || ||||| Sbjct 2588746 AGGTCA-CGGGCGCGGACCTCCTCCTTTCCG------TGGTTC-TTGCGGAGGTCAAGGA 2588695 Query 139496 AATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TT 139552 | || || || || | |||||| || || || |||||||| | || || || | Sbjct 2588694 ACTCGAAGACATCCGAGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGGCGCTTGT 2588635 Query 139553 TGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGAC 139612 ||||||| || ||||||| || ||| || ||||| || || | ||| ||| | | || Sbjct 2588634 TGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATGGGCACGATAC 2588575 Query 139613 CGCTCGCTGTTCCGTTGGTGCTACGG--ATGGGA-CTGTTGCGAGCTCGGACGTCATGTA 139669 || | | ||||||||||| | ||| ||| | | | | || |||| | || Sbjct 2588574 CGTTGGAGGTTCCGTTGGT--TCCGGCAATGTAAGATCCAGTG-GCACGGATGCGGTGGG 2588518 Query 139670 CATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCTCG 139728 | |||| |||||||| ||| | | ||||| || | |||| || | | || ||| Sbjct 2588517 CGTTGAGACCGATTCCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTG-AGGGTGTCG 2588459 Query 139729 TATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGT 139788 || ||||| |||||||| |||| ||| ||||| ||||| || || || || | Sbjct 2588458 TAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCAAGAAGAGAGCTGAGCC 2588399 Query 139789 AGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATC 139848 | |||||||| || || || || ||||| ||||| | | | ||||| Sbjct 2588398 TGGGGAGTGCCGGCGTTGAAGAGGGTGGGGGAGGCGTGTGTGAAGAACTTCTGGGACATG 2588339 Query 139849 AATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGC 139908 | | ||| || || ||| | || | | ||| || ||||||||||| || ||| Sbjct 2588338 TAGTTGTAGGTCTCAATGACCTTCTCGACATCATCGCCCCAGATACCGACAGCAACACGC 2588279 Query 139909 ATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGT 139966 || | ||| || || | ||||| | | ||| | ||| || || || | || Sbjct 2588278 ATGATCATGTGCTGAGGTCTCTCGGCAATCTTGCCGTTGATCTTCAAGAGGTAGGATCG- 2588220 Query 139967 TCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATCG 140007 ||| || |||||| ||||||||||| |||||||| ||| Sbjct 2588219 -CTCCAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCG 2588180 >seq5 Length=5891385 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || | ||||| || | | Sbjct 1784680 ATGCAGATCTTTGTCAAGACCCTCACGGGAAAGACCATCACATTGGAAGTTGAGTCGTCG 1784739 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || ||||| || ||||| || ||||| || || || || Sbjct 1784740 GACACAATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCAG 1784799 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || ||||||||||| ||| | |||| || || ||| Sbjct 1784800 CAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGAACCCTGTCTGACTACAAC 1784859 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| ||||| || ||||||||| | || | || ||||| Sbjct 1784860 ATCCAAAAGGAGTCGACTCTGCACTTGGTGCTCCGTCTCCGTGGAGG 1784906 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 24702 CGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA 24761 ||||||||||||| | || || || ||||| || || || || || || || || || Sbjct 1784162 CGATGCAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCT 1784221 Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 | || || | || | || || |||||||| ||||| ||||| || || || |||| Sbjct 1784222 CGGATACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGATC 1784281 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || || ||||||||||||| || ||||| |||||| | | | || || || | Sbjct 1784282 AGCAGCGCCTGATCTTTGCCGGAAAGCAGCTCGAGGATGGTCGTACTCTCTCCGACTACA 1784341 Query 24882 ACATTCAAAAGGAATCGACACTACAC 24907 |||| || ||||| || || || ||| Sbjct 1784342 ACATCCAGAAGGAGTCCACCCTCCAC 1784367 >seq1 Length=8787864 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || ||||| ||||| || || || || || | || Sbjct 8578724 ATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTCC 8578665 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || ||||| || || || || Sbjct 8578664 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 8578605 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || |||||||||||| | | | || || || ||| Sbjct 8578604 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGAGCGACTACAAC 8578545 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| ||||| || ||| |||| |||| Sbjct 8578544 ATCCAGAAGGAGTCGACTCTTCACCTGGTCCTGCG 8578510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897526891640