Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq5 129 1e-24 >seq5 Length=5891385 Score = 129 bits (142), Expect = 1e-24 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | | ||| || || ||||||||||| || || || || || || || |||| Sbjct 1784908 TACCTCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAG 1784849 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || ||| ||||| || || || || ||||||||||| || | || || || || | Sbjct 1784848 ACAGGGTTCGGCCGTCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGG 1784789 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760 | ||||| ||||| || |||||| ||||| || || || || || || || | || Sbjct 1784788 GGATTCCCTCCTTGTCCTGAATC-TTGCTCTTCACGTTGTCGATTGTGTCCGACGACTCA 1784730 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || || ||||| || || | ||||| ||||| |||||||| Sbjct 1784729 ACTTCCAATGTGATGGTCTTTCCCGTGAGGGTCTTGACAAAGATCTGCAT 1784680 Score = 114 bits (126), Expect = 3e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| |||||||||||||| || ||||| || || |||||| || | | || Sbjct 1785123 ACGGAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCACTCAGGGTGCGGCC 1785064 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || | || || ||||||||||| || | || || || || || || || ||||| Sbjct 1785063 ATCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTT 1785004 Query 82715 ATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773 || || ||| ||||| || || || || ||||| || | || ||||||| || | Sbjct 1785003 GTCCTGGATC-TTGCTCTTGACGTTGTCGATCGTGTCTGATGACTCGACTTCCAGCGTAA 1784945 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || |||| ||||| || || |||||||| Sbjct 1784944 TCGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 1784908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981827036464407