Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 3e-14 >seq5 Length=5891385 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | || | || || ||| ||| || || |||||||| ||||| Sbjct 1784679 ACCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGA 1784620 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | || |||||||| ||||||| |||||||||||| | || Sbjct 1784619 TAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCCGGGGG 1784560 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| ||| ||| | | |||| ||| | ||||||| ||||||| Sbjct 1784559 GATGCCCTCCTTGTCCTGAATCTTC-GACTTGACATTGTCGATGGTGTCGGACGATTCCA 1784501 Query 33701 CGTCAACCGTGATCGTTTTACCTGT 33725 | || | ||||| || || || || Sbjct 1784500 CCTCGAGGGTGATGGTCTTTCCGGT 1784476 Score = 84.2 bits (92), Expect = 1e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | |||||| || ||||| ||| ||||| |||||||| || || || || || | Sbjct 1784895 ACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTTCGGCC 1784836 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| |||| || || || ||||| || | ||||||||| || | || | || || || Sbjct 1784835 GTCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTT 1784776 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||| || |||| | | ||| | ||||| || || || || | |||| Sbjct 1784775 GTCCTGAATCTTGCTCTTCA-CGTTGTCGATTGTGTCCGACGACTCAACTTCCAATGTGA 1784717 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || || | || || ||||||||||||||| Sbjct 1784716 TGGTCTTTCCCGTGAGGGTCTTGACAAAGATCTGCATA 1784679 Score = 82.4 bits (90), Expect = 5e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| |||||||| || || | || || | || Sbjct 1784366 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCATCCTCGAGCTGC 1784307 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||||||||| |||| ||||||||||| | || | ||||| ||||| || || Sbjct 1784306 TTTCCGGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTT- 1784248 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | |||| ||| | ||| || || || || |||| ||||| || || || || Sbjct 1784247 GGACTTGACATTGTCAATGGTATCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 1784188 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | || || || ||||||||||| Sbjct 1784187 AAGGGTCTTGACGAAGATCTGCAT 1784164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703947920960