Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq5 93.3 3e-14
>seq5
Length=5891385
Score = 93.3 bits (102), Expect = 3e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||| | || | || || ||| ||| || || |||||||| |||||
Sbjct 1784679 ACCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGA 1784620
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || || | || |||||||| ||||||| |||||||||||| | ||
Sbjct 1784619 TAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCCGGGGG 1784560
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| ||| ||| | | |||| ||| | ||||||| |||||||
Sbjct 1784559 GATGCCCTCCTTGTCCTGAATCTTC-GACTTGACATTGTCGATGGTGTCGGACGATTCCA 1784501
Query 33701 CGTCAACCGTGATCGTTTTACCTGT 33725
| || | ||||| || || || ||
Sbjct 1784500 CCTCGAGGGTGATGGTCTTTCCGGT 1784476
Score = 84.2 bits (92), Expect = 1e-11
Identities = 151/218 (69%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| | |||||| || ||||| ||| ||||| |||||||| || || || || || |
Sbjct 1784895 ACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTTCGGCC 1784836
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
||| |||| || || || ||||| || | ||||||||| || | || | || || ||
Sbjct 1784835 GTCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTT 1784776
Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712
||| ||| || |||| | | ||| | ||||| || || || || | ||||
Sbjct 1784775 GTCCTGAATCTTGCTCTTCA-CGTTGTCGATTGTGTCCGACGACTCAACTTCCAATGTGA 1784717
Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || || || || | || || |||||||||||||||
Sbjct 1784716 TGGTCTTTCCCGTGAGGGTCTTGACAAAGATCTGCATA 1784679
Score = 82.4 bits (90), Expect = 5e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| || ||| ||| || || |||||||| |||||||| || || | || || | ||
Sbjct 1784366 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCATCCTCGAGCTGC 1784307
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
||||||||||| |||| ||||||||||| | || | ||||| ||||| || ||
Sbjct 1784306 TTTCCGGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTT- 1784248
Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
| | |||| ||| | ||| || || || || |||| ||||| || || || ||
Sbjct 1784247 GGACTTGACATTGTCAATGGTATCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 1784188
Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749
| || || || |||||||||||
Sbjct 1784187 AAGGGTCTTGACGAAGATCTGCAT 1784164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703947920960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |