Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 104 6e-17 seq5 91.5 3e-13 >seq1 Length=8787864 Score = 104 bits (114), Expect = 6e-17 Identities = 156/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 206159 AGGCTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAG 206218 |||| |||||| ||||| || ||| || || || || || || ||||| | || | Sbjct 8578731 AGGC-AAAATG---CAGATCTTCGTCAAGACCCTTACGGGTAAGACTATCACCCTTGAGG 8578676 Query 206219 TGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTT 206278 |||| ||| ||||| |||| || ||| ||||| || || || || |||||| Sbjct 8578675 TGGAGTCTTCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTC 8578616 Query 206279 TGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGG 206338 |||||| || | || |||||||| || |||||| |||| ||||| | || || Sbjct 8578615 CCCCGGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGA 8578556 Query 206339 CCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 ||| |||||| ||||||| ||||| ||||||||||| || Sbjct 8578555 GCGACTACAACATCCAGAAGGAGTCGACTCTTCACCTGGT 8578516 >seq5 Length=5891385 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| ||||| || ||||| | || |||||| || ||||| |||| Sbjct 1784466 CAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAATCGTCCGACACCATCGACAA 1784525 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || || || || ||||| || | || || || Sbjct 1784526 TGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGTCTGATTTT 1784585 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||||||||||| | || ||||| | || | |||| |||||| | ||||| ||||| Sbjct 1784586 CGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGGAGTC 1784645 Query 206364 TACTCTTCACCTTGT 206378 || || |||||||| Sbjct 1784646 CACCCTCCACCTTGT 1784660 Score = 89.7 bits (98), Expect = 1e-12 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || ||||| ||||| || ||||||| || || ||| Sbjct 1784911 CAGATTTTCGTCAAGACCCTGACCGGAAAGACGATTACGCTGGAAGTCGAGTCATCAGAC 1784970 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || || |||||| || Sbjct 1784971 ACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 1785030 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| || || ||||||||||| ||||| | || || ||||||||| | Sbjct 1785031 CGCCTGATCTTTGCTGGCAAGCAGTTGGAGGATGGCCGCACCCTGAGTGATTACAACATT 1785090 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||| ||||||||||| ||| | ||| Sbjct 1785091 CAGAAGGAGTCTACTCTGCACTTGGTT 1785117 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || |||||| | || || || || || Sbjct 1784167 CAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCGGAT 1784226 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || || ||||| ||| ||||| || Sbjct 1784227 ACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAGCAG 1784286 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| |||||||||||| | || ||||| | ||| | |||| |||||| || Sbjct 1784287 CGCCTGATCTTTGCCGGAAAGCAGCTCGAGGATGGTCGTACTCTCTCCGACTACAACATC 1784346 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || || |||||||| Sbjct 1784347 CAGAAGGAGTCCACCCTCCACCTTGT 1784372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820603152973