Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 6e-17
seq5 91.5 3e-13
>seq1
Length=8787864
Score = 104 bits (114), Expect = 6e-17
Identities = 156/220 (71%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 206159 AGGCTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAG 206218
|||| |||||| ||||| || ||| || || || || || || ||||| | || |
Sbjct 8578731 AGGC-AAAATG---CAGATCTTCGTCAAGACCCTTACGGGTAAGACTATCACCCTTGAGG 8578676
Query 206219 TGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTT 206278
|||| ||| ||||| |||| || ||| ||||| || || || || ||||||
Sbjct 8578675 TGGAGTCTTCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTC 8578616
Query 206279 TGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGG 206338
|||||| || | || |||||||| || |||||| |||| ||||| | || ||
Sbjct 8578615 CCCCGGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGA 8578556
Query 206339 CCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378
||| |||||| ||||||| ||||| ||||||||||| ||
Sbjct 8578555 GCGACTACAACATCCAGAAGGAGTCGACTCTTCACCTGGT 8578516
>seq5
Length=5891385
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || ||||| ||||| || ||||| | || |||||| || ||||| ||||
Sbjct 1784466 CAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAATCGTCCGACACCATCGACAA 1784525
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| |||||||| || || || || || ||||| || | || || ||
Sbjct 1784526 TGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGTCTGATTTT 1784585
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||||||||||||| | || ||||| | || | |||| |||||| | ||||| |||||
Sbjct 1784586 CGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGGAGTC 1784645
Query 206364 TACTCTTCACCTTGT 206378
|| || ||||||||
Sbjct 1784646 CACCCTCCACCTTGT 1784660
Score = 89.7 bits (98), Expect = 1e-12
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || ||||| ||||| || ||||||| || || |||
Sbjct 1784911 CAGATTTTCGTCAAGACCCTGACCGGAAAGACGATTACGCTGGAAGTCGAGTCATCAGAC 1784970
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || || || |||||| ||
Sbjct 1784971 ACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 1785030
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| || || ||||||||||| ||||| | || || ||||||||| |
Sbjct 1785031 CGCCTGATCTTTGCTGGCAAGCAGTTGGAGGATGGCCGCACCCTGAGTGATTACAACATT 1785090
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
||||| ||||||||||| ||| | |||
Sbjct 1785091 CAGAAGGAGTCTACTCTGCACTTGGTT 1785117
Score = 84.2 bits (92), Expect = 5e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || |||||| | || || || || ||
Sbjct 1784167 CAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCGGAT 1784226
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || || ||||| ||| ||||| ||
Sbjct 1784227 ACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAGCAG 1784286
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| |||||||||||| | || ||||| | ||| | |||| |||||| ||
Sbjct 1784287 CGCCTGATCTTTGCCGGAAAGCAGCTCGAGGATGGTCGTACTCTCTCCGACTACAACATC 1784346
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || ||||||||
Sbjct 1784347 CAGAAGGAGTCCACCCTCCACCTTGT 1784372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820603152973
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |