Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3 147 2e-30 >seq3 Length=6663688 Score = 147 bits (162), Expect = 2e-30 Identities = 576/889 (65%), Gaps = 25/889 (3%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| || || ||||| || |||| |||||| | | || | ||| ||| | ||| Sbjct 2589682 TTGACGACCTGGAACTCACCAGCCAACACACGGCGGGAGTAGATGTTGGAGGTGTAGGGC 2589623 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || || |||| || ||||| | || || | || | || ||||||||| |||| | Sbjct 2589622 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGAGGTAGAGGCAGTAGGCATGGGAGCCAAC 2589563 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072 | || || || | ||||| | ||| | | ||||||||| | ||||||||| Sbjct 2589562 AGCAGACTGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTCAAAGACTCCCAGTCCCAA 2589503 Query 147073 ATCGACGAGGGCGTCACGT---TCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 | | ||| || |||| |||||||||| |||||||| | ||| || | |||| Sbjct 2589502 AGGTCAGTGGGAGTAACGTCCTTCCACATGTCATACTGGAGGATGCCTTGAGAGACGGGC 2589443 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAA-TTCACAGCTTGCCTCGAG 147188 ||| || | || | ||| ||| || || || | |||| | | || || Sbjct 2589442 GAGCCCTCGTAGGTGGAGTAAGGTCCCTCCTCCTTGGCAATGTTCATCGAGGCCGTC-AG 2589384 Query 147189 CGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTC--GCTTCTTCGCTC 147246 || | | ||| ||||| ||| ||| || ||||| || | ||| || || | Sbjct 2589383 GGCAGCGTGGTACATGGTCTCGAAGATCTGCTTGTTGAG--CTGTCTGGCCTCGGGCGAC 2589326 Query 147247 TCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATA 147306 || | ||||| |||||| || || || || || | |||||||| |||||| ||||| Sbjct 2589325 TCAAAGGGCATGCGCAGAGCCAAGAAAGCGTCAGCAAGACCCTGGACACCGACACCGATG 2589266 Query 147307 GGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT--ATGGGATAGTGGTTGCGATCAA 147364 || || || ||||||| | || || || | ||| ||||||||| ||| | Sbjct 2589265 GGGCGGTGGCGCATGTTGCTGT--TGCGTGCCTCCTGAACGGGGTAGTGGTTGACATCGA 2589208 Query 147365 TAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCAT 147424 | |||||||| ||||| || || || || | || | | || |||| ||| |||| Sbjct 2589207 TGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACCTCGTGCAGCTTCTGGAAGTCAT 2589148 Query 147425 AAGT-CCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACG 147483 |||| |||| || | || ||| | | || || | || ||||| ||||||||| Sbjct 2589147 AAGTGCCCGAGTTGTAGTCG-ACGAAAGCGGGCAGAGCCAAGGAGGCCAGGTTGCAGACG 2589089 Query 147484 GCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTAT 147542 || ||| || || | || ||||| | ||| || | |||||||||| || || Sbjct 2589088 GCGACCTCGTCAGGTGCCG-AGTACTCAATGATCTCAGTGCACAGGTTGGAGCTGCGAAT 2589030 Query 147543 GACTCCCAAATTTTGCTGATTGCTTTTCCGATT-GCACGCGTCTTTGAAGAGCATGTACG 147601 ||| | || | ||| ||||| || || || ||| | ||| ||| |||||||| | | Sbjct 2589029 AGTTCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCATG-GTCCTTGTAGAGCATGAAGG 2588971 Query 147602 GTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCA 147658 | || |||||| || | |||| || | ||| || | ||| || | | Sbjct 2588970 GGTTACCAGTCTCGGTCTGAGCCTCAAGAATGGCATACC---AGAGCTTCTGTGCCCTGA 2588914 Query 147659 CCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGC 147718 || ||| ||||||||| |||||| |||||||| ||| ||||| |||| Sbjct 2588913 TAGTCTTGCGACCACGGCCCTCGGCCTCGTACTTCTCGTACAGGGCCTCGAACTCATCGC 2588854 Query 147719 CGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCA 147767 ||||||| ||||| ||||| || |||| | || |||||||| | ||| Sbjct 2588853 CGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGGGTCCA 2588805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611122550680