Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq3 183 4e-40
seq1 158 2e-32
>seq3
Length=6663688
Score = 183 bits (202), Expect = 4e-40
Identities = 284/398 (71%), Gaps = 6/398 (2%)
Strand=Plus/Minus
Query 332852 TGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATG 332911
|| ||||| || ||||| | | ||||||||||| || | |||||| | ||||||
Sbjct 2257287 TGTGCGTCGGTCAGGCGGGCGTATCGCAGGATGGCGCACCTCGACTGCAGCGGCTCGATA 2257228
Query 332912 ACCATTGACGACGTG-TTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCAT 332970
| | ||| | || |||||||| | ||| || |||||||| |||| | | |||||
Sbjct 2257227 ATC-TTGTTGCTCTGGTTGCAGGCAAAGGCGAAGCGCGTCGTGTTGGAGTAGATCTCCAT 2257169
Query 332971 GGTCGACCGGAGGGCCTGTTGGGCCGCCGG-CGTGAGGCAGTCGGCCTCGTCGAGGATGA 333029
||| |||||||||||| ||||| |||| ||| | || ||||||||||||||||||||
Sbjct 2257168 GGTTCGCCGGAGGGCCTGCTGGGC-GCCGCTCGTCATGCTGTCGGCCTCGTCGAGGATGA 2257110
Query 333030 TGATCTTGTGGCGCCCGTGCGG-CAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATC 333088
|| |||||| | ||| |||| ||| ||| | ||| ||| | ||||| |
Sbjct 2257109 CGAGCTTGTGCCTGCCG-GCGGCCAGGGTCACCTTCTTCTGCGCGAAGCCCTTGATCCTG 2257051
Query 333089 TTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCG 333148
|| ||||| ||||| | ||||||||||||||| || ||||| || || || ||||| | |
Sbjct 2257050 TTCCGCACCACGTCGATGCCGCGCTCGTCCGAGGCATTGAGCTCCAGGACTGCCTCCTTG 2256991
Query 333149 GCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCG 333208
| | | |||| || |||||||||||| | |||||| ||||| || ||||
Sbjct 2256990 TACGACTCGCCCAGAAGCTGCCGCGCCAGGCACAGCACGCTCGTCGTCTTTCCAATGCCA 2256931
Query 333209 GGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTC 333246
||| |||| | | || || |||||||||||| ||
Sbjct 2256930 GGCATGCCCGAGATGATGACGTGGGGCATGTTGCCTTC 2256893
Score = 154 bits (170), Expect = 2e-31
Identities = 214/300 (71%), Gaps = 0/300 (0%)
Strand=Plus/Plus
Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCC 259942
|||||| | |||||| ||| |||| ||||| || | ||||| ||||| || |||
Sbjct 2588328 ACCTACAACTACATGTCCCAGAAGTTCTTCACACACGCCTCCCCCACCCTCTTCAACGCC 2588387
Query 259943 GGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATC 260002
||||| || | | ||| || || ||||| ||| | |||||||||| || ||
Sbjct 2588388 GGCACTCCCCAGGCTCAGCTCTCTTCTTGCTTCCTGGTTGACATGAAGGATGACAGCATT 2588447
Query 260003 GAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATC 260062
||||| ||||| ||||| |||||| ||||| | ||||||||| |||||| || |||
Sbjct 2588448 GAGGGTATCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGATGGCCGGTGGAATC 2588507
Query 260063 GGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAG 260122
||| | ||| ||| | || ||| | || | ||| | || || ||||||||
Sbjct 2588508 GGTCTCAACGCCCACCGCATCCGTGCCACTGGATCTTACATTGCCGGAACCAACGGAACC 2588567
Query 260123 TCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
|||||||| | |||||||||||||| || || ||| |||| || | ||||||||||||
Sbjct 2588568 TCCAACGGTATCGTGCCCATGCTTCGTGTCTTCAACAACACTGCCAGATACGTCGACCAG 2588627
Score = 87.8 bits (96), Expect = 3e-11
Identities = 139/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 262092 AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACA 262151
|| |||||| |||||| | | ||| || | |||||| || | |||| |||| ||||||
Sbjct 2588926 AGCTCTGGTATGCCATTCTTGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTCTACA 2588985
Query 262152 AGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAA 262209
||||| | ||||| | ||||||||| ||||||| || || | || ||| ||||
Sbjct 2588986 AGGACCATGCCAACCGCAAGAGCAACCAGAAGAACCTTGGAACTATTCG-CAG-CTCCAA 2589043
Query 262210 CCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAACCTCTC 262269
||||||||| |||||| | ||| ||| | || ||||| || |||||||| |
Sbjct 2589044 CCTGTGCACTGAGATCATTGAGTACTCGGCACCTGACGAGGTCGCCGTCTGCAACCTGGC 2589103
Query 262270 GAGCGTGGCCCTGCCC 262285
| |||| ||||||
Sbjct 2589104 CTCCTTGGCTCTGCCC 2589119
>seq1
Length=8787864
Score = 158 bits (174), Expect = 2e-32
Identities = 193/258 (75%), Gaps = 4/258 (2%)
Strand=Plus/Plus
Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577
|| ||||||| ||||| || |||||||||||| | ||||| | | |||| | |||||
Sbjct 4218836 AGAAGATCATTGTCGACGCTGTCGAGATCGAGCAGGAGTTCCTGACCGAGGCTCTGCCCT 4218895
Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637
|| || ||||||||||| ||| | |||||| |||||||||| | || ||||||||
Sbjct 4218896 GCGCTCTGCTCGGCATGAACTCCAAC-CTCATGAAGCAGTACATTG-AGTTCGTCGCCGA 4218953
Query 1456638 CCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCAT 1456697
||| ||||||| || |||||| | |||||| |||||| | ||||||| ||| |
Sbjct 4218954 CCGTCTGCTCGTCGCCCTCGGCAAC-GAGAAGGTCTACCGCTCCACCAACCCCTTCGACT 4219012
Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGT 1456756
|||||| ||||| || | |||||||||||||| |||||| ||||| || || |
Sbjct 4219013 TCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGTGACT 4219072
Query 1456757 ACGCCAAGGCCGGCGTCA 1456774
|| |||||||| ||||
Sbjct 4219073 ACCAAAAGGCCGGTGTCA 4219090
Score = 122 bits (134), Expect = 1e-21
Identities = 221/318 (69%), Gaps = 14/318 (4%)
Strand=Plus/Plus
Query 1455760 CATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCG 1455819
||||| | || | | ||| ||| |||||||| || ||||| |||| ||||| ||||| |
Sbjct 4218162 CATCCTC-ACTATCAGATCTGGCAAATGTAC-AAGAAGGCTCAGGCTTCCTTCTGGACTG 4218219
Query 1455820 CCGAGGAGGTCGACCTCGGCGCCGA----CACGGTCCACTGGGTGTC---GCTGAGCGAC 1455872
| |||||| | || || | || |||| ||||| | | | |||
Sbjct 4218220 CTGAGGAGATTGATCTGTCCAAGGATCTCCACG----ACTGGAACAACAAGATCAACGAA 4218275
Query 1455873 GACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGT 1455932
||||||| | |||||| ||| |||| ||||| || ||||||| || ||||||||
Sbjct 4218276 GACGAGCAATACTTCATCTCCCACATCCTGGCCTTCTT-CGCCGCCTCTGACGGCATCGT 4218334
Query 1455933 GGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTT 1455992
|||||||||| | || || | |||||||| | || |||||||| | ||
Sbjct 4218335 CAATGAGAACCTGGTTGAGCGTTTCAGCGGCGAGGTCCAGATCCCCGAGGCACGATGCTT 4218394
Query 1455993 TTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGA 1456052
||||| ||||||||| || || ||||| ||||| || ||||||||||| || |||||
Sbjct 4218395 CTACGGTTTCCAGATCATGATGGAGAACATTCACTCCGAGACCTACTCGCTGCTCATCGA 4218454
Query 1456053 CACCTACGTCAAGGAccc 1456070
|||||| ||| ||| ||
Sbjct 4218455 TACCTACATCAGGGAGCC 4218472
Score = 93.3 bits (102), Expect = 6e-13
Identities = 117/157 (75%), Gaps = 9/157 (6%)
Strand=Plus/Plus
Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCG 1456179
|| |||||||||||||| | |||||||||| || ||||| ||||| ||||||
Sbjct 4218580 AAGAAGGCCGACTGGGCTCTCAAGTGGATCACTGACGAGGAG----TCGAC-CTTTGCTC 4218634
Query 1456180 AGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238
|||| | ||| |||||| | ||||||||| ||||| ||| || |||| | |||
Sbjct 4218635 AGCGCTTGATCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGTGGTGCTTTCGCCTCCA 4218694
Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|||| ||| | |||||||| || || ||||| |||||
Sbjct 4218695 TCTTCTGGTTGAAGAAGCGTGGTCTGATGCCTGGTCT 4218731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177809946126106
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |