Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3 183 4e-40 seq1 158 2e-32 >seq3 Length=6663688 Score = 183 bits (202), Expect = 4e-40 Identities = 284/398 (71%), Gaps = 6/398 (2%) Strand=Plus/Minus Query 332852 TGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATG 332911 || ||||| || ||||| | | ||||||||||| || | |||||| | |||||| Sbjct 2257287 TGTGCGTCGGTCAGGCGGGCGTATCGCAGGATGGCGCACCTCGACTGCAGCGGCTCGATA 2257228 Query 332912 ACCATTGACGACGTG-TTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCAT 332970 | | ||| | || |||||||| | ||| || |||||||| |||| | | ||||| Sbjct 2257227 ATC-TTGTTGCTCTGGTTGCAGGCAAAGGCGAAGCGCGTCGTGTTGGAGTAGATCTCCAT 2257169 Query 332971 GGTCGACCGGAGGGCCTGTTGGGCCGCCGG-CGTGAGGCAGTCGGCCTCGTCGAGGATGA 333029 ||| |||||||||||| ||||| |||| ||| | || |||||||||||||||||||| Sbjct 2257168 GGTTCGCCGGAGGGCCTGCTGGGC-GCCGCTCGTCATGCTGTCGGCCTCGTCGAGGATGA 2257110 Query 333030 TGATCTTGTGGCGCCCGTGCGG-CAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATC 333088 || |||||| | ||| |||| ||| ||| | ||| ||| | ||||| | Sbjct 2257109 CGAGCTTGTGCCTGCCG-GCGGCCAGGGTCACCTTCTTCTGCGCGAAGCCCTTGATCCTG 2257051 Query 333089 TTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCG 333148 || ||||| ||||| | ||||||||||||||| || ||||| || || || ||||| | | Sbjct 2257050 TTCCGCACCACGTCGATGCCGCGCTCGTCCGAGGCATTGAGCTCCAGGACTGCCTCCTTG 2256991 Query 333149 GCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCG 333208 | | | |||| || |||||||||||| | |||||| ||||| || |||| Sbjct 2256990 TACGACTCGCCCAGAAGCTGCCGCGCCAGGCACAGCACGCTCGTCGTCTTTCCAATGCCA 2256931 Query 333209 GGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTC 333246 ||| |||| | | || || |||||||||||| || Sbjct 2256930 GGCATGCCCGAGATGATGACGTGGGGCATGTTGCCTTC 2256893 Score = 154 bits (170), Expect = 2e-31 Identities = 214/300 (71%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCC 259942 |||||| | |||||| ||| |||| ||||| || | ||||| ||||| || ||| Sbjct 2588328 ACCTACAACTACATGTCCCAGAAGTTCTTCACACACGCCTCCCCCACCCTCTTCAACGCC 2588387 Query 259943 GGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATC 260002 ||||| || | | ||| || || ||||| ||| | |||||||||| || || Sbjct 2588388 GGCACTCCCCAGGCTCAGCTCTCTTCTTGCTTCCTGGTTGACATGAAGGATGACAGCATT 2588447 Query 260003 GAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATC 260062 ||||| ||||| ||||| |||||| ||||| | ||||||||| |||||| || ||| Sbjct 2588448 GAGGGTATCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGATGGCCGGTGGAATC 2588507 Query 260063 GGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAG 260122 ||| | ||| ||| | || ||| | || | ||| | || || |||||||| Sbjct 2588508 GGTCTCAACGCCCACCGCATCCGTGCCACTGGATCTTACATTGCCGGAACCAACGGAACC 2588567 Query 260123 TCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 |||||||| | |||||||||||||| || || ||| |||| || | |||||||||||| Sbjct 2588568 TCCAACGGTATCGTGCCCATGCTTCGTGTCTTCAACAACACTGCCAGATACGTCGACCAG 2588627 Score = 87.8 bits (96), Expect = 3e-11 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 262092 AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACA 262151 || |||||| |||||| | | ||| || | |||||| || | |||| |||| |||||| Sbjct 2588926 AGCTCTGGTATGCCATTCTTGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTCTACA 2588985 Query 262152 AGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAA 262209 ||||| | ||||| | ||||||||| ||||||| || || | || ||| |||| Sbjct 2588986 AGGACCATGCCAACCGCAAGAGCAACCAGAAGAACCTTGGAACTATTCG-CAG-CTCCAA 2589043 Query 262210 CCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAACCTCTC 262269 ||||||||| |||||| | ||| ||| | || ||||| || |||||||| | Sbjct 2589044 CCTGTGCACTGAGATCATTGAGTACTCGGCACCTGACGAGGTCGCCGTCTGCAACCTGGC 2589103 Query 262270 GAGCGTGGCCCTGCCC 262285 | |||| |||||| Sbjct 2589104 CTCCTTGGCTCTGCCC 2589119 >seq1 Length=8787864 Score = 158 bits (174), Expect = 2e-32 Identities = 193/258 (75%), Gaps = 4/258 (2%) Strand=Plus/Plus Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577 || ||||||| ||||| || |||||||||||| | ||||| | | |||| | ||||| Sbjct 4218836 AGAAGATCATTGTCGACGCTGTCGAGATCGAGCAGGAGTTCCTGACCGAGGCTCTGCCCT 4218895 Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637 || || ||||||||||| ||| | |||||| |||||||||| | || |||||||| Sbjct 4218896 GCGCTCTGCTCGGCATGAACTCCAAC-CTCATGAAGCAGTACATTG-AGTTCGTCGCCGA 4218953 Query 1456638 CCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCAT 1456697 ||| ||||||| || |||||| | |||||| |||||| | ||||||| ||| | Sbjct 4218954 CCGTCTGCTCGTCGCCCTCGGCAAC-GAGAAGGTCTACCGCTCCACCAACCCCTTCGACT 4219012 Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGT 1456756 |||||| ||||| || | |||||||||||||| |||||| ||||| || || | Sbjct 4219013 TCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGTGACT 4219072 Query 1456757 ACGCCAAGGCCGGCGTCA 1456774 || |||||||| |||| Sbjct 4219073 ACCAAAAGGCCGGTGTCA 4219090 Score = 122 bits (134), Expect = 1e-21 Identities = 221/318 (69%), Gaps = 14/318 (4%) Strand=Plus/Plus Query 1455760 CATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCG 1455819 ||||| | || | | ||| ||| |||||||| || ||||| |||| ||||| ||||| | Sbjct 4218162 CATCCTC-ACTATCAGATCTGGCAAATGTAC-AAGAAGGCTCAGGCTTCCTTCTGGACTG 4218219 Query 1455820 CCGAGGAGGTCGACCTCGGCGCCGA----CACGGTCCACTGGGTGTC---GCTGAGCGAC 1455872 | |||||| | || || | || |||| ||||| | | | ||| Sbjct 4218220 CTGAGGAGATTGATCTGTCCAAGGATCTCCACG----ACTGGAACAACAAGATCAACGAA 4218275 Query 1455873 GACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGT 1455932 ||||||| | |||||| ||| |||| ||||| || ||||||| || |||||||| Sbjct 4218276 GACGAGCAATACTTCATCTCCCACATCCTGGCCTTCTT-CGCCGCCTCTGACGGCATCGT 4218334 Query 1455933 GGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTT 1455992 |||||||||| | || || | |||||||| | || |||||||| | || Sbjct 4218335 CAATGAGAACCTGGTTGAGCGTTTCAGCGGCGAGGTCCAGATCCCCGAGGCACGATGCTT 4218394 Query 1455993 TTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGA 1456052 ||||| ||||||||| || || ||||| ||||| || ||||||||||| || ||||| Sbjct 4218395 CTACGGTTTCCAGATCATGATGGAGAACATTCACTCCGAGACCTACTCGCTGCTCATCGA 4218454 Query 1456053 CACCTACGTCAAGGAccc 1456070 |||||| ||| ||| || Sbjct 4218455 TACCTACATCAGGGAGCC 4218472 Score = 93.3 bits (102), Expect = 6e-13 Identities = 117/157 (75%), Gaps = 9/157 (6%) Strand=Plus/Plus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCG 1456179 || |||||||||||||| | |||||||||| || ||||| ||||| |||||| Sbjct 4218580 AAGAAGGCCGACTGGGCTCTCAAGTGGATCACTGACGAGGAG----TCGAC-CTTTGCTC 4218634 Query 1456180 AGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238 |||| | ||| |||||| | ||||||||| ||||| ||| || |||| | ||| Sbjct 4218635 AGCGCTTGATCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGTGGTGCTTTCGCCTCCA 4218694 Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||| ||| | |||||||| || || ||||| ||||| Sbjct 4218695 TCTTCTGGTTGAAGAAGCGTGGTCTGATGCCTGGTCT 4218731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177809946126106