Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq5 125 6e-24 seq1 120 3e-22 seq6 96.9 3e-15 >seq5 Length=5891385 Score = 125 bits (138), Expect = 6e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || ||||||||| |||||||| || | || |||||| |||| || Sbjct 1784889 CACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTTCGGCCGTCCTC 1784830 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||||||| ||||| || | ||||||||||||| || | | |||||||||| Sbjct 1784829 CAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTG 1784770 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||| ||||| |||| | | ||||| ||| || || |||| ||||| || | Sbjct 1784769 AATCTTGCTCTTCA-CGTTGTCGATTGTGTCCGACGACTCAACTTCCAATGTGATGGTCT 1784711 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||||| | || || ||||| |||||||| Sbjct 1784710 TTCCCGTGAGGGTCTTGACAAAGATCTGCAT 1784680 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| |||||| |||||||||||||| || ||| || | || ||| Sbjct 1785116 ACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCACTCAGGGTGCGGCCATCCTCC 1785057 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | |||||| || ||||| |||| ||||||||||||| || | | |||||||||| | Sbjct 1785056 AACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 1784997 Query 35648 ATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||| | |||| | | |||||| || || || |||| ||| ||||| || Sbjct 1784996 ATCTTGCTCTTGA-CGTTGTCGATCGTGTCTGATGACTCGACTTCCAGCGTAATCGTCTT 1784938 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| || || || || |||||||| Sbjct 1784937 TCCGGTCAGGGTCTTGACGAAAATCTGCAT 1784908 Score = 96.9 bits (106), Expect = 3e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| | ||| || | || || |||||||| || || || Sbjct 1784643 CTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAA 1784584 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| |||| || | || |||||||||| ||||| ||| | | | Sbjct 1784583 AATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATT 1784524 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | |||||| |||||||||||| | ||||| || || || || Sbjct 1784523 GTCGATGGTGTCGGACGATTCCACCTCGAGGGTGATGGTCTTTCCGGT 1784476 >seq1 Length=8787864 Score = 120 bits (132), Expect = 3e-22 Identities = 144/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || ||| || | || ||||||||||| || || || Sbjct 8578533 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAA 8578592 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| | |||||||||| |||||| ||| | | | Sbjct 8578593 GATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATT 8578652 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || |||||||| | ||||| || |||||||| | || || || Sbjct 8578653 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTAAGGGTCTTGAC 8578712 Query 35725 AAATATCTGCATTCTG 35740 || ||||||||| || Sbjct 8578713 GAAGATCTGCATTTTG 8578728 Score = 100 bits (110), Expect = 3e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 41171 TGTGGATGCGCTCGAGGATCAGCTGCGCGACACGATCACCCTTCATCACCACAAAGTCCA 41230 ||| ||||||||||| || ||||| ||||| || || |||| ||||| ||||||| Sbjct 1569719 TGTAGATGCGCTCGATGACGAGCTGGGCGACGCGGTCGCCCTCGCTCACCGCAAAGTCGG 1569778 Query 41231 CGTCGTTGTTGTTCACCATCACTATGCCCACGTTGCCCGTGTAGTCGGGATCGATGACGC 41290 ||||| ||| ||| | || || || || | |||| |||||||| |||||||||| Sbjct 1569779 CGTCGCTGTGGTTGAACAGCAGTACCTTGACCTGGCCCCGGTAGTCGGCGTCGATGACGC 1569838 Query 41291 CAGCAGCAATGTCGATCTTGTGCTTCAACGCCAGCCCCGATCGGGGCGCGATCCTACCGT 41350 | || | ||||||| |||||| ||||| || || ||||| ||||| | |||| Sbjct 1569839 CCGCGCCCGTGTCGATGAAGTGCTTGGCGGCCAGGCCGGAGCGGGGGGCGATGCGGCCGT 1569898 >seq6 Length=3941639 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| ||| || ||| || | || || |||||||| || || || | Sbjct 189207 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGA 189266 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||||||||||| || | | |||||||||| |||||| ||| | | | Sbjct 189267 TCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 189326 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | |||||| || |||||||| | ||||| || || ||||||| || ||||| | Sbjct 189327 CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 189386 Query 35727 A 35727 | Sbjct 189387 A 189387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793526746040