Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3 141 1e-28 >seq3 Length=6663688 Score = 141 bits (156), Expect = 1e-28 Identities = 441/677 (65%), Gaps = 12/677 (2%) Strand=Plus/Minus Query 69547 CCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATA 69606 ||||| || || || || ||||||| | ||| || | | | || || || ||||| Sbjct 2588836 CCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATG 2588777 Query 69607 AATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCT 69666 || || ||||||||||| || || | || || || | || | || || ||||| Sbjct 2588776 AAGAGGTCGGGAATCCAGAGGGCCAGGAACAGGTCACGGGCGCGGACCTCCTCCTTTCCG 2588717 Query 69667 GTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 69726 || || || || || ||||| | | ||| || ||||| || || || || || Sbjct 2588716 TGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCGAGGTAGATG 2588657 Query 69727 GCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAG 69786 || | | | || || || || || || ||||| || | ||||||||||||||| || || Sbjct 2588656 GCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAG 2588597 Query 69787 ACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCT 69846 || | ||||| || | ||||| || || | || || ||||| | ||| ||| ||| Sbjct 2588596 ACACGAAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTTCCGGCAATGTAAGATCCA 2588537 Query 69847 CTTGCGCGAATATTACTAATAGAT-AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGC 69905 | || || || | | | ||||| ||||| || ||||| || ||||| | || Sbjct 2588536 GTGGCACGGAT-GCGGTGGGCGTTGAGACCGATTCCACCGGCCATCTTGGAGATCATGGC 2588478 Query 69906 ACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAA 69965 || || | ||||| || |||||||| ||||| ||||| |||||| || || || Sbjct 2588477 GCAGGTCTTGAGGGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAA 2588418 Query 69966 ACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGT 70025 || ||| | ||| || ||| || || || || | || || || ||||| || Sbjct 2588417 GCAAGAAGAGAGCTGAGCCTGGGGAGTGCCGGCGTTGAAGAGGGTGGGGGAGGCGTGTGT 2588358 Query 70026 GAACCATTTTTCAGA-AAGCAGATTGTATGTTTCAATAGCTGATTCTATATC----CCAC 70080 ||| | || | || | | || ||||| || ||||| | || | ||| || | Sbjct 2588357 GAAGAACTTCTGGGACATGTAG-TTGTAGGTCTCAATGACCTTCTCGACATCATCGCCCC 2588299 Query 70081 TGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTA 70140 | || || | || |||||||| | ||| |||||||||| || | | || Sbjct 2588298 AG----ATACCGACAGCAACACGCATGATCATGTGCTGAGGTCTCTCGGCAATCTTGCCG 2588243 Query 70141 TTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAG 70200 || || ||||| ||||| ||| |||||||| || || ||||| || | ||| ||| Sbjct 2588242 TTGATCTTCAAGAGGTAGGATCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAG 2588183 Query 70201 TCTCTTTCGTAAATAAT 70217 || | ||||| | ||| Sbjct 2588182 TCGCGATCGTAGACAAT 2588166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908688377320