Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq3 141 1e-28
>seq3
Length=6663688
Score = 141 bits (156), Expect = 1e-28
Identities = 441/677 (65%), Gaps = 12/677 (2%)
Strand=Plus/Minus
Query 69547 CCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATA 69606
||||| || || || || ||||||| | ||| || | | | || || || |||||
Sbjct 2588836 CCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATG 2588777
Query 69607 AATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCT 69666
|| || ||||||||||| || || | || || || | || | || || |||||
Sbjct 2588776 AAGAGGTCGGGAATCCAGAGGGCCAGGAACAGGTCACGGGCGCGGACCTCCTCCTTTCCG 2588717
Query 69667 GTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 69726
|| || || || || ||||| | | ||| || ||||| || || || || ||
Sbjct 2588716 TGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCGAGGTAGATG 2588657
Query 69727 GCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAG 69786
|| | | | || || || || || || ||||| || | ||||||||||||||| || ||
Sbjct 2588656 GCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAG 2588597
Query 69787 ACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCT 69846
|| | ||||| || | ||||| || || | || || ||||| | ||| ||| |||
Sbjct 2588596 ACACGAAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTTCCGGCAATGTAAGATCCA 2588537
Query 69847 CTTGCGCGAATATTACTAATAGAT-AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGC 69905
| || || || | | | ||||| ||||| || ||||| || ||||| | ||
Sbjct 2588536 GTGGCACGGAT-GCGGTGGGCGTTGAGACCGATTCCACCGGCCATCTTGGAGATCATGGC 2588478
Query 69906 ACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAA 69965
|| || | ||||| || |||||||| ||||| ||||| |||||| || || ||
Sbjct 2588477 GCAGGTCTTGAGGGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAA 2588418
Query 69966 ACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGT 70025
|| ||| | ||| || ||| || || || || | || || || ||||| ||
Sbjct 2588417 GCAAGAAGAGAGCTGAGCCTGGGGAGTGCCGGCGTTGAAGAGGGTGGGGGAGGCGTGTGT 2588358
Query 70026 GAACCATTTTTCAGA-AAGCAGATTGTATGTTTCAATAGCTGATTCTATATC----CCAC 70080
||| | || | || | | || ||||| || ||||| | || | ||| || |
Sbjct 2588357 GAAGAACTTCTGGGACATGTAG-TTGTAGGTCTCAATGACCTTCTCGACATCATCGCCCC 2588299
Query 70081 TGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTA 70140
| || || | || |||||||| | ||| |||||||||| || | | ||
Sbjct 2588298 AG----ATACCGACAGCAACACGCATGATCATGTGCTGAGGTCTCTCGGCAATCTTGCCG 2588243
Query 70141 TTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAG 70200
|| || ||||| ||||| ||| |||||||| || || ||||| || | ||| |||
Sbjct 2588242 TTGATCTTCAAGAGGTAGGATCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAG 2588183
Query 70201 TCTCTTTCGTAAATAAT 70217
|| | ||||| | |||
Sbjct 2588182 TCGCGATCGTAGACAAT 2588166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908688377320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |