Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq3 82.4 6e-11
>seq3
Length=6663688
Score = 82.4 bits (90), Expect = 6e-11
Identities = 181/270 (67%), Gaps = 11/270 (4%)
Strand=Plus/Plus
Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTG 19500
|||||||||||||| | || || | ||| || || |||||||| || || || ||
Sbjct 3190466 AATGGTCCTGAAATTCTGAACAAGTTTGTCGGGCAGTCGGAAGAGAACGTCAGAAAGATG 3190525
Query 19501 TTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTAT 19559
||||| || || ||| ||| | | || | |||||| ||||| | ||||| ||
Sbjct 3190526 TTTGCCGATGCCGAA-AAGGAGTACAAGGAGAAGGGCGAGGAAAGTGGCCTCCACATCAT 3190584
Query 19560 AATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGG---------TTCTGGTGTAAA 19610
|| | |||||||||||||| |||| ||||| ||||| | ||||| |
Sbjct 3190585 CATCTTTGATGAATTGGACGCTGTCTGCAAGCAGAGAGGCAGTGGTGCTGGTGGTGGCAC 3190644
Query 19611 TGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACT 19670
|||||| ||||| ||||| || || || || | || | || ||||| | |||||
Sbjct 3190645 TGGAGTGGGTGACAGCGTTGTGAACCAGCTTCTCACCAAGCTCGATGGTGTCGATCAACT 3190704
Query 19671 GAATAATATTTTAGTTATTGGCATGACTAA 19700
|| || || || | || || ||||| ||
Sbjct 3190705 CAACAACATATTGCTCATCGGTATGACCAA 3190734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455937028065
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |