Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3 167 3e-36 seq1 86.0 8e-12 >seq3 Length=6663688 Score = 167 bits (184), Expect = 3e-36 Identities = 885/1396 (63%), Gaps = 32/1396 (2%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||||||| | ||||| || || ||||| || || || |||| || || | ||| || Sbjct 2589644 GTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAGGTAGA 2589585 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 ||| || ||||| || |||| || |||||||| || | ||| | || |||||| | | Sbjct 2589584 GGCAGTAGGCATGGGAGCCAACAGCAGACTGTTGCGGACACCGTGCTGCTTGATCTGGGC 2589525 Query 110827 CTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTC--CCACATGTCAAACT 110882 ||| | | |||||||| | | | || | || | || | | |||||||||| ||| Sbjct 2589524 CTTCAAAGACTCCCAGTCCCAAAGGTCAG-TGGGAGTAACGTCCTTCCACATGTCATACT 2589466 Query 110883 GAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATA-GGAACCTTGGGCTTCA 110941 | || | ||||| || |||| || ||||| |||| || || ||| ||| Sbjct 2589465 GGAGGATGCCTTGAGAGACGGGCGAGCCCTCGTAGGTGGAGTAAGGTCCCTCCTCCTT-- 2589408 Query 110942 GCCAATTCACAGCTCG-CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 111000 | |||| || | | || ||||| ||||| |||||||| || ||||| | || Sbjct 2589407 GGCAATGTTCATCGAGGCCGTCAGGGCAGCGTGGTACATGGTCTCGAAGATCTGCTTGTT 2589348 Query 111001 CATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCC 111055 | || |||| || || ||||| |||| || | || ||| | || Sbjct 2589347 GAGCTGTCTGGCCTCGGGCGACTCAAAGGGCATGCGCAGAGCCAAGAAAG-----CGTCA 2589293 Query 111056 GCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTC 111115 || ||||| || ||||| | ||| || || | ||| ||||| || || || || | Sbjct 2589292 GCAAGACCCTGGACACCGACACCGATGGGGCGGTGGCGCATGTTGCTGTTGCGTGCCTCC 2589233 Query 111116 TCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG 111175 | |||||| || || || |||| ||| || || || | || ||| Sbjct 2589232 TGAACGGGGTAGTGGTTGACATCGATGATCTTGTTCAGGTTGCGAACGACGACCTGGGTG 2589173 Query 111176 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 111235 | || || || || | | ||| |||||| | | | | ||| | || || Sbjct 2589172 ACCTCGTGCAGCTTCTGGAAGTCATAAGTGCCCGAGTTGTAGTCGACGAAAGCGGGCAGA 2589113 Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295 || | || |||| ||||| || || ||| || | | |||||| | || || Sbjct 2589112 GCCAAGGAGGCCAGGTTGCAGACGGCGACCTCGTCAGGTGCCGAGTACTCAATGATCTCA 2589053 Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTG-CA 111354 || || | |||||| || ||| || || | ||||| ||||| ||||| |||| || Sbjct 2589052 GTGCACAGGTTGGAGCTGCGAATAGTTCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCA 2588993 Query 111355 CGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTT 111414 | ||||||||||||||| |||| | || ||||| ||||| | | ||||| || | Sbjct 2588992 TGG-TCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATGGCATA 2588934 Query 111415 CCAAA-CATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTG 111472 ||| | | || | | | || || | ||| | || ||||| ||||||||||| | Sbjct 2588933 CCAGAGCTTCTGTGCCCTGATAGTCTTGCGAC--CACGGCCCTCGGCCTCGTACTTCTCG 2588876 Query 111473 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 111532 || ||||| || ||||| || || ||||| ||| || || || || || || Sbjct 2588875 TACAGGGCCTCGAACTCATCGCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCAC 2588816 Query 111533 AAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 111592 | || | ||| | ||| | ||| || ||||||||||| ||||| |||||||| ||| Sbjct 2588815 ATCAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGG 2588756 Query 111593 GATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 111652 | || || || | || |||| || | || ||||| || | |||||| Sbjct 2588755 GCCAGGAACAGGTCACGGGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGGAGGTCAAGG 2588696 Query 111653 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCG 111708 ||||| | || ||||| |||||| ||||| || |||| || | | || | | | Sbjct 2588695 AACTCGAAGACATCCGAGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGGCGCTTG 2588636 Query 111709 ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 111768 | ||| | || | || || | || ||| ||| || || |||||||| || | || Sbjct 2588635 TTG-CCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATGGGCACGAT 2588577 Query 111769 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 111828 ||| | || || || || || ||| |||| | |||| | | ||| Sbjct 2588576 ACCGTTGGAGGTTCCGTTGGTTCCGGCAATGTAAGATCCAGTGGCACGGATGCGGTGGGC 2588517 Query 111829 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 111888 || | || || || || ||| ||| ||||| || || | | || || | || Sbjct 2588516 GTTGAGACCGATTCCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTA 2588457 Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948 |||||| | || ||| ||||| || | | ||||||||| || | ||| | Sbjct 2588456 GATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCAAGAAGAGAGCTGAGCCTG 2588397 Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCT 112007 || || || || ||||||||||| || | ||||| |||| | || | |||||||| | Sbjct 2588396 GGGAGTGCCGGCGTTGAAGAGGGTGGGGGAGGCGTGTGTGAAGA-ACTTCTGGGACATGT 2588338 Query 112008 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCA 112067 || ||| ||||| | ||| || | || || || ||| |||| || || |||| Sbjct 2588337 AGTTGTAGGTCTCAATGACCTTCTCGACATCATCGCCCCAGATACCGACAGCAACACGCA 2588278 Query 112068 TGAACATGTACTGTGG 112083 ||| ||||| ||| || Sbjct 2588277 TGATCATGTGCTGAGG 2588262 Score = 96.9 bits (106), Expect = 4e-15 Identities = 159/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 || || |||||||||||||||| || || || || | ||| || | |||||| Sbjct 594438 GCGTCGATCTCATCAATGAAGATGATGCAGGGAGTGTTCTTGCGCGCCGTCGAGAAGAGA 594379 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG--CGGCAGAGC 11747 || || || || |||||| |||||||||||||| || ||||| | | | || || | Sbjct 594378 TCTCGCACTCTCGAGGCACCAACACCAACAAACATTTCAACAAACTCGGAACCGCTGA-C 594320 Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807 ||| || ||| ||||| || || || || | || || ||||| ||||| || | Sbjct 594319 ACT-GAAGAAGGGGACGCCAGACTCTCCGGCAGTAGCCTTTGCCAGGAGAGTCTTACCAG 594261 Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 |||| || ||| ||||| | |||||| || ||||||||||| || Sbjct 594260 TACCGGGAGGACCTGCGAGGATGGCGCCGCGAGGGATCTTGGCTCC 594215 >seq1 Length=8787864 Score = 86.0 bits (94), Expect = 8e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || || || || || || || |||||| ||||| ||||| ||||| Sbjct 4218774 GTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATCAGACC 4218715 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 122786 |||||||||||||| | || | | ||| | || ||||||||||||||| || Sbjct 4218714 ACGCTTCTTCAACCAGAAGATGGAGGCGAAAGCACCACTGAAGAAGATACCCTCGAC 4218658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031897944800