Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq3 167 3e-36
seq1 86.0 8e-12
>seq3
Length=6663688
Score = 167 bits (184), Expect = 3e-36
Identities = 885/1396 (63%), Gaps = 32/1396 (2%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||||||||| | ||||| || || ||||| || || || |||| || || | ||| ||
Sbjct 2589644 GTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAGGTAGA 2589585
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826
||| || ||||| || |||| || |||||||| || | ||| | || |||||| | |
Sbjct 2589584 GGCAGTAGGCATGGGAGCCAACAGCAGACTGTTGCGGACACCGTGCTGCTTGATCTGGGC 2589525
Query 110827 CTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTC--CCACATGTCAAACT 110882
||| | | |||||||| | | | || | || | || | | |||||||||| |||
Sbjct 2589524 CTTCAAAGACTCCCAGTCCCAAAGGTCAG-TGGGAGTAACGTCCTTCCACATGTCATACT 2589466
Query 110883 GAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATA-GGAACCTTGGGCTTCA 110941
| || | ||||| || |||| || ||||| |||| || || ||| |||
Sbjct 2589465 GGAGGATGCCTTGAGAGACGGGCGAGCCCTCGTAGGTGGAGTAAGGTCCCTCCTCCTT-- 2589408
Query 110942 GCCAATTCACAGCTCG-CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 111000
| |||| || | | || ||||| ||||| |||||||| || ||||| | ||
Sbjct 2589407 GGCAATGTTCATCGAGGCCGTCAGGGCAGCGTGGTACATGGTCTCGAAGATCTGCTTGTT 2589348
Query 111001 CATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCC 111055
| || |||| || || ||||| |||| || | || ||| | ||
Sbjct 2589347 GAGCTGTCTGGCCTCGGGCGACTCAAAGGGCATGCGCAGAGCCAAGAAAG-----CGTCA 2589293
Query 111056 GCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTC 111115
|| ||||| || ||||| | ||| || || | ||| ||||| || || || || |
Sbjct 2589292 GCAAGACCCTGGACACCGACACCGATGGGGCGGTGGCGCATGTTGCTGTTGCGTGCCTCC 2589233
Query 111116 TCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG 111175
| |||||| || || || |||| ||| || || || | || |||
Sbjct 2589232 TGAACGGGGTAGTGGTTGACATCGATGATCTTGTTCAGGTTGCGAACGACGACCTGGGTG 2589173
Query 111176 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 111235
| || || || || | | ||| |||||| | | | | ||| | || ||
Sbjct 2589172 ACCTCGTGCAGCTTCTGGAAGTCATAAGTGCCCGAGTTGTAGTCGACGAAAGCGGGCAGA 2589113
Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295
|| | || |||| ||||| || || ||| || | | |||||| | || ||
Sbjct 2589112 GCCAAGGAGGCCAGGTTGCAGACGGCGACCTCGTCAGGTGCCGAGTACTCAATGATCTCA 2589053
Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTG-CA 111354
|| || | |||||| || ||| || || | ||||| ||||| ||||| |||| ||
Sbjct 2589052 GTGCACAGGTTGGAGCTGCGAATAGTTCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCA 2588993
Query 111355 CGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTT 111414
| ||||||||||||||| |||| | || ||||| ||||| | | ||||| || |
Sbjct 2588992 TGG-TCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATGGCATA 2588934
Query 111415 CCAAA-CATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTG 111472
||| | | || | | | || || | ||| | || ||||| ||||||||||| |
Sbjct 2588933 CCAGAGCTTCTGTGCCCTGATAGTCTTGCGAC--CACGGCCCTCGGCCTCGTACTTCTCG 2588876
Query 111473 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 111532
|| ||||| || ||||| || || ||||| ||| || || || || || ||
Sbjct 2588875 TACAGGGCCTCGAACTCATCGCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCAC 2588816
Query 111533 AAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 111592
| || | ||| | ||| | ||| || ||||||||||| ||||| |||||||| |||
Sbjct 2588815 ATCAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGG 2588756
Query 111593 GATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 111652
| || || || | || |||| || | || ||||| || | ||||||
Sbjct 2588755 GCCAGGAACAGGTCACGGGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGGAGGTCAAGG 2588696
Query 111653 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCG 111708
||||| | || ||||| |||||| ||||| || |||| || | | || | | |
Sbjct 2588695 AACTCGAAGACATCCGAGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGGCGCTTG 2588636
Query 111709 ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 111768
| ||| | || | || || | || ||| ||| || || |||||||| || | ||
Sbjct 2588635 TTG-CCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATGGGCACGAT 2588577
Query 111769 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 111828
||| | || || || || || ||| |||| | |||| | | |||
Sbjct 2588576 ACCGTTGGAGGTTCCGTTGGTTCCGGCAATGTAAGATCCAGTGGCACGGATGCGGTGGGC 2588517
Query 111829 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 111888
|| | || || || || ||| ||| ||||| || || | | || || | ||
Sbjct 2588516 GTTGAGACCGATTCCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTA 2588457
Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948
|||||| | || ||| ||||| || | | ||||||||| || | ||| |
Sbjct 2588456 GATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCAAGAAGAGAGCTGAGCCTG 2588397
Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCT 112007
|| || || || ||||||||||| || | ||||| |||| | || | |||||||| |
Sbjct 2588396 GGGAGTGCCGGCGTTGAAGAGGGTGGGGGAGGCGTGTGTGAAGA-ACTTCTGGGACATGT 2588338
Query 112008 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCA 112067
|| ||| ||||| | ||| || | || || || ||| |||| || || ||||
Sbjct 2588337 AGTTGTAGGTCTCAATGACCTTCTCGACATCATCGCCCCAGATACCGACAGCAACACGCA 2588278
Query 112068 TGAACATGTACTGTGG 112083
||| ||||| ||| ||
Sbjct 2588277 TGATCATGTGCTGAGG 2588262
Score = 96.9 bits (106), Expect = 4e-15
Identities = 159/226 (70%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689
|| || |||||||||||||||| || || || || | ||| || | ||||||
Sbjct 594438 GCGTCGATCTCATCAATGAAGATGATGCAGGGAGTGTTCTTGCGCGCCGTCGAGAAGAGA 594379
Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG--CGGCAGAGC 11747
|| || || || |||||| |||||||||||||| || ||||| | | | || || |
Sbjct 594378 TCTCGCACTCTCGAGGCACCAACACCAACAAACATTTCAACAAACTCGGAACCGCTGA-C 594320
Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807
||| || ||| ||||| || || || || | || || ||||| ||||| || |
Sbjct 594319 ACT-GAAGAAGGGGACGCCAGACTCTCCGGCAGTAGCCTTTGCCAGGAGAGTCTTACCAG 594261
Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853
|||| || ||| ||||| | |||||| || ||||||||||| ||
Sbjct 594260 TACCGGGAGGACCTGCGAGGATGGCGCCGCGAGGGATCTTGGCTCC 594215
>seq1
Length=8787864
Score = 86.0 bits (94), Expect = 8e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729
|||||||||||| || || || || || || || |||||| ||||| ||||| |||||
Sbjct 4218774 GTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATCAGACC 4218715
Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 122786
|||||||||||||| | || | | ||| | || ||||||||||||||| ||
Sbjct 4218714 ACGCTTCTTCAACCAGAAGATGGAGGCGAAAGCACCACTGAAGAAGATACCCTCGAC 4218658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031897944800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |