Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq5 141 3e-28
seq3 96.9 1e-14
>seq5
Length=5891385
Score = 141 bits (156), Expect = 3e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || ||||| || || || ||||| || || || || || ||
Sbjct 1784394 CATACCACCACGAAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 1784335
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| || || || ||||| |||||||| || || |||||||| ||
Sbjct 1784334 GGAGAGAGTACGACCATCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGG 1784275
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| ||||| || ||||| || || | || ||||| ||||| | ||| || | ||
Sbjct 1784274 GGGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTATCCGAGGACTC 1784215
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || | ||||| ||||| || || || || || ||||||||
Sbjct 1784214 GACCTCAAGAGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 1784164
Score = 136 bits (150), Expect = 1e-26
Identities = 171/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||| ||||| | | || || | || ||||| ||||| ||||| || || || ||
Sbjct 1784910 CATACCTCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTC 1784851
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | ||||| || || || || || || ||||||||||| ||||| ||||| || ||
Sbjct 1784850 AGACAGGGTTCGGCCGTCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGG 1784791
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685
|| ||||| || || |||||||| || ||| || || || || || | || || | |
Sbjct 1784790 GGGGATTCCCTCCTTGTCCTGAATCTT-GCTCTTCACGTTGTCGATTGTGTCCGACGACT 1784732
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||||| | ||| | |||||||| || || || || ||||| ||||||||
Sbjct 1784731 CAACTTCCAATGTGATGGTCTTTCCCGTGAGGGTCTTGACAAAGATCTGCAT 1784680
Score = 132 bits (146), Expect = 1e-25
Identities = 172/235 (73%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563
|||| ||| ||||| | | ||||| | || ||||||||||| || ||||| || ||
Sbjct 1785141 TTACTGACCGCCACGGAGACGGAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTA 1785082
Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623
|||| | || || ||||| || | || || ||||||||||| || || ||||| ||
Sbjct 1785081 ATCACTCAGGGTGCGGCCATCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTC 1785022
Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAGATG 140682
|| || || || || || ||||| || || ||| || || || || |||| || ||||
Sbjct 1785021 CGGGGGGATACCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATCGTGTCTGATG 1784963
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || |||| ||||||||||| || || || || |||||||||||
Sbjct 1784962 ACTCGACTTCCAGCGTAATCGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 1784908
Score = 129 bits (142), Expect = 2e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || ||||| || || || ||||| || ||||| || || ||
Sbjct 1784682 CATACCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTC 1784623
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|||| || || ||||| ||||| || ||||| || || || ||||| |||||||| ||
Sbjct 1784622 GGATAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCCGG 1784563
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || |||||||| || | || ||||| || || | || || | |||
Sbjct 1784562 GGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGATTC 1784503
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
|| || || || | ||||||||||| || || || ||
Sbjct 1784502 CACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGAC 1784464
>seq3
Length=6663688
Score = 96.9 bits (106), Expect = 1e-14
Identities = 409/641 (64%), Gaps = 9/641 (1%)
Strand=Plus/Minus
Query 349277 GATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATT 349336
|| || |||||| | || || || || | ||| || || || || || ||||| ||||
Sbjct 6399415 GACCAGGGTAACCGCACCACTCCCTCGTTCGTCGCCTTCACAGACACCGAGCGATTGATC 6399356
Query 349337 GGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAG 349396
|| ||| |||| || || |||| || || || || || ||||| || || || |||
Sbjct 6399355 GGAGATGCTGCCAAGAACCAAGTCGCAATGAACCCGAACAACACGGTCTTCGACGCCAAG 6399296
Query 349397 CGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAATCTGATCTAAAACATTTTC 349454
|| || ||||| | | || |||| | | | || |||| | || || || |
Sbjct 6399295 CGTCTGATTGGCCGCAAGTTCGCTGATGCCGAGGTTCAGG--CTGACATGAAGCACTTCC 6399238
Query 349455 CTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTG 349514
| || | ||||| || | ||| || || | | ||||| || || || || |
Sbjct 6399237 CCTTCAAGGTTGTCGACAAGGCCGGC---AAGCCCAACGTCGAGGTCGAGTACAAGGGCG 6399181
Query 349515 A-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAA 349573
| | || || || |||||| || || || || ||| | | | || ||| ||
Sbjct 6399180 AGAGCAAGACC-TTCACACCCGAGGAGATCTCGTCCATGATCCTGATCAAGATGCGTGAG 6399122
Query 349574 ATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTAT 349633
| || || | || | |||| || || || | ||||| || || || || |||||
Sbjct 6399121 ACCGCCGAGTCTTACCTCGGTGGCACCGTTACCAACGCTGTCATCACCGTCCCCGCCTAC 6399062
Query 349634 TTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTT 349693
|| || || | || ||| || || || || || || ||| | || | || ||
Sbjct 6399061 TTCAACGACTCGCAACGTCAGGCCACCAAGGACGCCGGTCTCATCTCCGGCCTCAACGTC 6399002
Query 349694 CTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGT 349753
|| | || || || || ||||| || || || ||||| || || || || || | |
Sbjct 6399001 CTCCGTATCATCAACGAGCCCACCGCCGCTGCCATTGCCTACGGTCTCGACAAGAAGGCC 6398942
Query 349754 GACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTA 349813
|| || || | || || || ||| | ||||||||||| || ||||| || ||
Sbjct 6398941 GAGGGCGAGCGCAACGTCCTGATCTTCGATCTGGGTGGTGGTACCTTCGATGTCTCTCTC 6398882
Query 349814 CTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGT 349873
|| || |||| ||||| || || || || || | || || ||||| || || || |||
Sbjct 6398881 CTCACCATTGAGGAGGGTATCTTCGAGGTCAAGTCCACCGCCGGTGACACTCACCTGGGT 6398822
Query 349874 GGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914
|| || || || || || ||||| ||| ||||| || ||
Sbjct 6398821 GGTGAGGACTTCGACAACCGTCTGGTTAACCATTTCGTGAA 6398781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515254147615439
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |