Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3 295 7e-75 seq1 120 3e-22 seq6 102 9e-17 >seq3 Length=6663688 Score = 295 bits (326), Expect = 7e-75 Identities = 530/768 (69%), Gaps = 6/768 (1%) Strand=Plus/Plus Query 53174 GAGACGCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACG 53233 |||| |||||| | | ||||||| || || | |||||| || || || | | Sbjct 2588256 GAGAGACCTCAGCACATGATCATGCGTGTTGCTGTCGGTATCTGGGGCGATGATGTCGAG 2588315 Query 53234 CGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACC 53293 ||| |||||| ||| ||| ||| ||| |||| ||| || |||||| | || ||| Sbjct 2588316 AAGGTCATTGAGACCTACAACTACATGTCCCAGAAGTTCTTCACACACGCCTCCCCCACC 2588375 Query 53294 CTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAG 53353 || |||||||| || || || ||||| | || ||||||||||| | |||||| Sbjct 2588376 CTCTTCAACGCCGGCACTCCCCAGGCTCAGCTCTCTTCTTGCTTCCTGGTTGACATGAAG 2588435 Query 53354 GATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGG 53413 |||||| || || || |||||||| || |||||| || ||| ||||||||| | Sbjct 2588436 GATGACAGCATTGAGGGTATCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGATG 2588495 Query 53414 TCGGGTGGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGG 53471 | ||||| |||||| || || || | | || ||||||| | || | || | Sbjct 2588496 GCCGGTGGAATCGGTCTCAAC-GCCC-ACCGCATCCGTGCCACTGGATCTTACATTGCCG 2588553 Query 53472 GGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCC 53531 | || ||||| | || | || |||||||| ||||| || |||||||||||||| ||| Sbjct 2588554 GAACCAACGGAACCTCCAACGGTATCGTGCCCATGCTTCGTGTCTTCAACAACACTGCCA 2588613 Query 53532 GGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGT 53591 | |||||| |||||||||| |||||| || | || ||||||||||||||||| | Sbjct 2588614 GATACGTCGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTTGCCATCTACCTCGAGCCTT 2588673 Query 53592 GGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGC 53651 ||||| | || | | ||||| || || || || ||| || || | || ||| | | Sbjct 2588674 GGCACTCGGATGTCTTCGAGTTCCTTGACCTCCGCAAGAACCACGGAAAGGAGGAGGTCC 2588733 Query 53652 GCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGA 53711 || |||||||||||| || || |||||||| |||||||||||| | || |||| Sbjct 2588734 GCGCCCGTGACCTGTTCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAGA 2588793 Query 53712 AGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTAC 53770 || ||| || ||| |||||||||||| ||||||||||| |||||| | | || |||| Sbjct 2588794 AGAACGGTGACTGGACCCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTG-CTAC 2588852 Query 53771 GGTGAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAG 53830 || || ||||| | | |||| || ||||| | ||||||| |||| Sbjct 2588853 GGCGATGAGTTCGAGGCCCTGTACGAGAAGTACGAGGCCGAGGGCCGTGGTCGCAAGACT 2588912 Query 53831 GTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCG 53890 ||| ||| | || | ||| |||| || || || ||| ||||| || | || Sbjct 2588913 ATCAGGGCACAGAAGCTCTGGTATGCCATTCTTGAGGCTCAGACCGAGACTGGTAACCCC 2588972 Query 53891 TACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 | |||| ||||||||| | |||| |||||||||||||||||| Sbjct 2588973 TTCATGCTCTACAAGGACCATGCCAACCGCAAGAGCAACCAGAAGAAC 2589020 Score = 96.9 bits (106), Expect = 4e-15 Identities = 102/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATG-GAGAATCC 55845 || || |||||||| | ||||||||||||||||||||||||||| |||| | || || Sbjct 2589855 GCCGACCGTGGTGCCTTCATCGACCAGTCCCAGTCTCTGAACATTCACATGCGTGACCCC 2589914 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 || ||| |||| | | ||| ||||||||| || |||||| || |||||||| || Sbjct 2589915 ACCA-TGGGCAAGATCACCTCCATGCACTTTGCTGGCTGGAAGCTCGGTCTCAAGACTGG 2589973 Query 55906 TATGTACTATCT 55917 |||||||| || Sbjct 2589974 CATGTACTACCT 2589985 >seq1 Length=8787864 Score = 120 bits (132), Expect = 3e-22 Identities = 334/504 (66%), Gaps = 29/504 (6%) Strand=Plus/Minus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || |||||||| ||||| || || ||||||||||| || ||| |||||||||||||| Sbjct 4219073 TAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATG 4219014 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCC---CCAAACTGTGCCATGAGG 74579 ||||||| ||||| | | | ||| | |||||| || | | || | ||| Sbjct 4219013 AAGTCGAAGGGGTTGGTGGAGCGGTAGAC---CTTCTCGTTGCCGA---GGGCGACGAGC 4218960 Query 74580 CGA---TCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGT 74636 || || || || || | |||||||||| |||| | | |||||||| || Sbjct 4218959 AGACGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGA 4218900 Query 74637 TTGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAAT- 74695 ||| ||||| |||||||| | ||||| ||| | |||| ||| | |||||| Sbjct 4218899 GCGCAGGGCAGAGCCTCGGTCAGGAACTCCTGCTCGATCTCGACAGCG---TCGACAATG 4218843 Query 74696 --CTTGTG---AATGTCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGCGTCACG 74750 ||| || ||| || ||| |||| || | | ||||||||| | | | Sbjct 4218842 ATCTTCTGGACAATCTCCTTGCTGGGGCGGTTGT---TGAGGTGAGAGAACAACAAGCAA 4218786 Query 74751 GCAAACTCCTGATGCGAG-CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 || || || || ||| || || || | || | || || || || | || || Sbjct 4218785 GCGAAGTCGGTGTG-GAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACC 4218727 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 |||||| || ||||||||||||||||| ||||||| ||| | ||||||||||||||| Sbjct 4218726 AGGCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGCACCACTGAAGAAGAT 4218667 Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA---CGGTGCATCGGAAGTCAT 74926 || ||||| |||||||||| | ||| || || || || | ||| ||| || Sbjct 4218666 ACCCTCGACGGCAGCAAAGGCGATCAAGCGCTGAGCAAAGGTCGACTCCTCGTCAGTGAT 4218607 Query 74927 CCAAGTCTGAGCCCATTCAGCTTT 74950 ||| | ||||||| || || || Sbjct 4218606 CCACTTGAGAGCCCAGTCGGCCTT 4218583 >seq6 Length=3941639 Score = 102 bits (112), Expect = 9e-17 Identities = 298/453 (66%), Gaps = 6/453 (1%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || || ||||| ||||| |||| |||| |||| ||| ||||| || ||||| || | | Sbjct 2015056 CCTGTGCCGATACCCTCACCACCATTGATGAGAACCATTGGCACGATCGGGGCATATACC 2015115 Query 151936 TCCGGCTCCA-CCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTC-AGC-C 151992 | ||||| | ||| ||| || || |||| || | || || | ||| || | Sbjct 2015116 TTGGGCTCAATCCTTTTG-CCATCTTCCACGTTGTTCTCCAGGTTGGGCTCGTCCAGAGC 2015174 Query 151993 GGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCC 152052 ||| ||| ||| || | | ||| ||| | ||| ||| || || | |||||| Sbjct 2015175 GGA--GAAGATCTTCCGGGCAAAGGGAGACAATCTTGTGTGGATATAACGAGCGCTGGCA 2015232 Query 152053 GCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGG 152112 ||||| || || || || | | ||||| | || ||| ||||||| |||| Sbjct 2015233 GCATCGGATCCTCCAGCAAGTCTGGAACCAAAGTTACCGCTGGGTTCGAGGACATTGACA 2015292 Query 152113 TTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCA 152172 ||||||| || || || ||||| |||||| | || || ||||| | ||||| Sbjct 2015293 TTGTTGGATCCAACAAAGTTCTGGGCCAAACCAATGATGGTCTGTTGCAGTGACACTTCA 2015352 Query 152173 CCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC 152232 |||||||| ||||||||||| || | || || || ||||| | |||||||| ||||| Sbjct 2015353 CCGTGGTGGTACGCCGTCTGTTCAGAGACATAACCAGCCAATTCGACCACCTTCTTGTCC 2015412 Query 152233 GTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCG 152292 | |||||| ||| || || || | | ||||| || || || || | |||| Sbjct 2015413 TTGAGCAGGTTGCGCTTCAGGCAAGCAAAGAGGACCTTTCGTTGACCGGGCTTGAGACCG 2015472 Query 152293 TCCACCACGTGAGGAATCGAACGCTTGATGTCC 152325 || | || | || || || | | || ||||| Sbjct 2015473 TCGATCATGGAGGGGATAGATCTCATGTTGTCC 2015505 Score = 100 bits (110), Expect = 3e-16 Identities = 199/293 (68%), Gaps = 4/293 (1%) Strand=Plus/Plus Query 117311 ATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTC 117370 || ||||||| ||| |||||||| || |||||||| | | ||| || | || || Sbjct 2015215 ATATAACGAGCGCTGGCAGCATCGGATCCTCCAGCAAGTCTGGAACCAAAGTTACCGCTG 2015274 Query 117371 GGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTA 117430 || || | || || | ||||||| || |||||||| || ||||| | || || Sbjct 2015275 GGTTCGAGGACATTGACATTGTTGGATCCAACAAAGTTCTGGGCCAAACCAATGATGGTC 2015334 Query 117431 CCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGC 117490 ||| || | | ||||| ||||| ||||||||||| || | || || || |||| Sbjct 2015335 TGTTGCAGTGACACTTCACCGTGGTGGTACGCCGTCTGTTCAGAGACATAACCAGCCAAT 2015394 Query 117491 TGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGC 117548 | |||||||| |||| ||| |||||| ||| ||||| ||| | | ||||| | Sbjct 2015395 TCGACCACCTTCTTGTCCTTGA--GCAGGTTGCGCTTCAGGCAAGCAAAGAGGACCTTTC 2015452 Query 117549 GCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTTGATGTCC 117601 | |||| ||||| ||||| || || | ||||| || | | || ||||| Sbjct 2015453 GTTGACCGGGCTTGAGACCGTCGATCATGGAGGGGATAGATCTCATGTTGTCC 2015505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215911077400