Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3 300 2e-76 seq5 194 2e-44 seq1 185 1e-41 seq6 120 3e-22 >seq3 Length=6663688 Score = 300 bits (332), Expect = 2e-76 Identities = 814/1232 (66%), Gaps = 23/1232 (2%) Strand=Plus/Minus Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600 ||||||||| | ||| | |||||| | || | || || ||| || | || ||| || Sbjct 2589479 CCACATGTCATACTGGAGGATGCCTTGAGAGACGGGCGAGCCCTCGTAGGTGGAGTAAGG 2589420 Query 80601 GCCCTCCGTCTTGGCCA-GCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAA 80659 |||||| |||||| | | ||| ||| || | ||||| ||||| || ||| ||| | Sbjct 2589419 TCCCTCCTCCTTGGCAATGTTCAT-CGAGGCCGTCAGGGCAGCGTGGTACATGGTCTCGA 2589361 Query 80660 AGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGA 80719 ||| |||||| | | |||| || || || | || || || || || Sbjct 2589360 AGATCTGCTTGTTGAGCTGTCTGGCCTCGGGCGACTCAAAGGGCATGCGCAGAGCCAAGA 2589301 Query 80720 ACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCT 80779 | ||||||| || ||||| || |||| |||| |||||||||||| |||| | | Sbjct 2589300 AAGCGTCAGCAAGACCCTGGACACCGACACCGATGGGGCGGTGGCGCATGTT-GCTGTTG 2589242 Query 80780 CG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACA 80838 || |||||| ||| ||||| ||| |||||||| |||||||||||| || Sbjct 2589241 CGTGCCTCCTGAACGGGGTAGTGGTTGACATCGATGATCTTGTTCAGGTTGCGAACGACG 2589182 Query 80839 ACCCGTGTAACATCATGAAGTTTCTGAAAGTCG-AATTG-----GTTCCCCTTCACAAAT 80892 ||| | || || || || || ||||| ||||| || || ||| | || || Sbjct 2589181 ACCTGGGTGACCTCGTGCAGCTTCTGGAAGTCATAAGTGCCCGAGTTGTAGTCGACGAAA 2589122 Query 80893 GCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCG 80952 || || || || ||| ||||| ||||| ||||| ||||| |||| | | |||| Sbjct 2589121 GCGGGCAGAGCCAAGGAGGCCAGGTTGCAGACGGCGACCTCGTCAGGTGCCGAGTACTCA 2589062 Query 80953 ACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTG 81012 | ||| || ||||||| || || ||| || || ||||| |||||||| |||| Sbjct 2589061 ATGATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCAAGGTTCTTCTGGTTGCTCTTG 2589002 Query 81013 GCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGG 81072 |||| | |||||||||| |||| | ||| |||| |||||| ||| | || || Sbjct 2589001 CGGTTGGCATGGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGA 2588942 Query 81073 ATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATAC 81132 ||||| | ||| | || | ||| ||| |||||| ||| |||||| | ||| Sbjct 2588941 ATGGCATACCAGAGCTTCTGTGCCCTGATAGTCTTGCGACCACGGCCCTCGGCCTCGTAC 2588882 Query 81133 TTGGCGTAAGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTT 81191 || |||| | ||||||| | |||| | ||| | | |||| | ||||||||||| Sbjct 2588881 TTCTCGTACAGGGCCTCGAACTCATCGCCGTAGCAGT-CGGCGAGGCCAGGGCACTCGTT 2588823 Query 81192 AGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGAT 81251 |||||||||||| |||||| || ||||| ||| ||||||||| ||| || || Sbjct 2588822 GGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAAT 2588763 Query 81252 CCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAA 81311 ||||||||| ||||||||| ||| ||| ||||||| | || ||||| ||| | Sbjct 2588762 CCAGAGGGCCAGGAACAGGTCACGGGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGGAG 2588703 Query 81312 CTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTT 81371 || || || || | || |||| ||||| ||||| || || | ||| | | || Sbjct 2588702 GTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGG 2588643 Query 81372 GCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGG 81428 ||| ||||||||||| |||||| | |||||| ||| || ||||| | ||| || Sbjct 2588642 GCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATGGG 2588583 Query 81429 GATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CC 81486 | |||||| | || ||||| || || | || || || |||| || | | Sbjct 2588582 CACGATACCGTTGGAGGTTCCGTTGGTTCCGGCAATGTAAGATCCAGTGGCACGGATGCG 2588523 Query 81487 TTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATG 81546 || ||| |||||||| ||||| | | ||| || ||| || || || | | Sbjct 2588522 GTGGGCGTTG--AGACCGATTCCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTGAGG 2588465 Query 81547 GTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATC 81606 || || || || ||||| ||||| || | |||||||||| || ||| || || | | Sbjct 2588464 GTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCAAGAAGAGAGC 2588405 Query 81607 TGAGGGCTTTTTGA--GCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGT 81664 ||| || | || |||||| ||||| || || |||| ||||| |||| | | Sbjct 2588404 TGA--GCCTGGGGAGTGCCGGCGTTGAAGAGGGTGGGGGAGGCGTGTGTGAAGAACTTCT 2588347 Query 81665 TTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAG 81724 ||||| || ||||| || |||| | ||| || || ||||||| || Sbjct 2588346 GGGACATGTAGTTGTAGGTCTCAATGACCTTCTCGACATCATCGCCCCAGATACCGACAG 2588287 Query 81725 CTACACGCATAAACATGTACTGGGGCGTCTCG 81756 | |||||||| | ||||| ||| || ||||| Sbjct 2588286 CAACACGCATGATCATGTGCTGAGGTCTCTCG 2588255 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 80044 AGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGC 80103 || ||||||||||| |||||||| || ||||||||| | |||||| || ||| | Sbjct 2589985 AGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGCATGGAGGTGATC 2589926 Query 80104 TTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCC 80163 || | | ||||||| |||| |||||||||||||| ||||| |||||| || Sbjct 2589925 TTGCCCATGGTGGGGTCACGCATGTGAATGTTCAGAGACTGGGACTGGTCGATGAAGGCA 2589866 Query 80164 CCACGATCTGCCGCCAT 80180 ||||| || || ||||| Sbjct 2589865 CCACGGTCGGCGGCCAT 2589849 >seq5 Length=5891385 Score = 194 bits (214), Expect = 2e-44 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| |||||||||||||| || ||||||||||| ||||| Sbjct 1784164 ATGCAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCG 1784223 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | ||| | || || ||||||||||| || ||||| || || ||| Sbjct 1784224 GATACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAG 1784283 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| |||||||||| |||||| || | ||||| || Sbjct 1784284 CAGCGCCTGATCTTTGCCGGAAAGCAGCTCGAGGATGGTCGTACTCTCTCCGACTACAAC 1784343 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || ||| | || ||||| ||||| Sbjct 1784344 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTCCGCCTTCGTGGTGG 1784390 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || || ||||| || || | || |||||||| Sbjct 1784680 ATGCAGATCTTTGTCAAGACCCTCACGGGAAAGACCATCACATTGGAAGTTGAGTCGTCG 1784739 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||| || |||||||||||||||||||| || || |||||| Sbjct 1784740 GACACAATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCAG 1784799 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||||||||| || ||||| | || ||||| | ||||| || Sbjct 1784800 CAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGAACCCTGTCTGACTACAAC 1784859 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| || ||||| || | || | ||||| || || || Sbjct 1784860 ATCCAAAAGGAGTCGACTCTGCACTTGGTGCTCCGTCTCCGTGGAGG 1784906 Score = 149 bits (164), Expect = 7e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || ||||| ||||| || || || ||||| || || || | ||| | Sbjct 1784464 GTCAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAATCGTCCGACACCATCGAC 1784523 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| | ||| | || ||||||||||||||||| || || || || ||||||||||| ||| Sbjct 1784524 AATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGTCTGATT 1784583 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || ||||| || ||||||| || |||||| | ||||| || | || ||||| Sbjct 1784584 TTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGGAG 1784643 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| || || || ||| | ||||| || ||||| Sbjct 1784644 TCCACCCTCCACCTTGTCCTTCGTCTGCGTGGTGG 1784678 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || ||||| ||||| ||||| || || || |||||| Sbjct 1784908 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACGATTACGCTGGAAGTCGAGTCATCA 1784967 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| || || |||||||||||||| || || || |||||| Sbjct 1784968 GACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 1785027 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||| ||||| | ||||||| || ||||| || || || Sbjct 1785028 CAGCGCCTGATCTTTGCTGGCAAGCAGTTGGAGGATGGCCGCACCCTGAGTGATTACAAC 1785087 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || ||||| || ||||| || | || | ||||| || || || || Sbjct 1785088 ATTCAGAAGGAGTCTACTCTGCACTTGGTTCTCCGTCTCCGTGGCGGTCA 1785137 >seq1 Length=8787864 Score = 185 bits (204), Expect = 1e-41 Identities = 180/229 (79%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| |||||||| ||||| || |||||||| || |||||||| ||||| Sbjct 8578725 AATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTC 8578666 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | ||| | ||| | || || |||||||||||||||||||| || ||||| Sbjct 8578665 CGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 8578606 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 |||||| || || || ||||| ||||| || ||||||| || ||||| ||| ||||| | Sbjct 8578605 GCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGAGC-GACTACA 8578547 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| || |||||||| || ||| |||| || || ||||| Sbjct 8578546 ACATCCAGAAGGAGTCGACTCTTCACCTGGTCCTGCGCCTCCGTGGTGG 8578498 >seq6 Length=3941639 Score = 120 bits (132), Expect = 3e-22 Identities = 138/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || |||||||| || || || ||||| ||||| || | ||| Sbjct 189388 CTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCAT 189329 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || |||||||||||||| || || || ||||||||||| || Sbjct 189328 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCT 189269 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 || || ||||| ||||| || ||||||| || ||||| ||| ||||| || |||| | Sbjct 189268 GATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGA 189210 Query 27593 AGG 27595 ||| Sbjct 189209 AGG 189207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310307324560