Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq3 300 2e-76
seq5 194 2e-44
seq1 185 1e-41
seq6 120 3e-22
>seq3
Length=6663688
Score = 300 bits (332), Expect = 2e-76
Identities = 814/1232 (66%), Gaps = 23/1232 (2%)
Strand=Plus/Minus
Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600
||||||||| | ||| | |||||| | || | || || ||| || | || ||| ||
Sbjct 2589479 CCACATGTCATACTGGAGGATGCCTTGAGAGACGGGCGAGCCCTCGTAGGTGGAGTAAGG 2589420
Query 80601 GCCCTCCGTCTTGGCCA-GCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAA 80659
|||||| |||||| | | ||| ||| || | ||||| ||||| || ||| ||| |
Sbjct 2589419 TCCCTCCTCCTTGGCAATGTTCAT-CGAGGCCGTCAGGGCAGCGTGGTACATGGTCTCGA 2589361
Query 80660 AGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGA 80719
||| |||||| | | |||| || || || | || || || || ||
Sbjct 2589360 AGATCTGCTTGTTGAGCTGTCTGGCCTCGGGCGACTCAAAGGGCATGCGCAGAGCCAAGA 2589301
Query 80720 ACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCT 80779
| ||||||| || ||||| || |||| |||| |||||||||||| |||| | |
Sbjct 2589300 AAGCGTCAGCAAGACCCTGGACACCGACACCGATGGGGCGGTGGCGCATGTT-GCTGTTG 2589242
Query 80780 CG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACA 80838
|| |||||| ||| ||||| ||| |||||||| |||||||||||| ||
Sbjct 2589241 CGTGCCTCCTGAACGGGGTAGTGGTTGACATCGATGATCTTGTTCAGGTTGCGAACGACG 2589182
Query 80839 ACCCGTGTAACATCATGAAGTTTCTGAAAGTCG-AATTG-----GTTCCCCTTCACAAAT 80892
||| | || || || || || ||||| ||||| || || ||| | || ||
Sbjct 2589181 ACCTGGGTGACCTCGTGCAGCTTCTGGAAGTCATAAGTGCCCGAGTTGTAGTCGACGAAA 2589122
Query 80893 GCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCG 80952
|| || || || ||| ||||| ||||| ||||| ||||| |||| | | ||||
Sbjct 2589121 GCGGGCAGAGCCAAGGAGGCCAGGTTGCAGACGGCGACCTCGTCAGGTGCCGAGTACTCA 2589062
Query 80953 ACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTG 81012
| ||| || ||||||| || || ||| || || ||||| |||||||| ||||
Sbjct 2589061 ATGATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCAAGGTTCTTCTGGTTGCTCTTG 2589002
Query 81013 GCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGG 81072
|||| | |||||||||| |||| | ||| |||| |||||| ||| | || ||
Sbjct 2589001 CGGTTGGCATGGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGA 2588942
Query 81073 ATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATAC 81132
||||| | ||| | || | ||| ||| |||||| ||| |||||| | |||
Sbjct 2588941 ATGGCATACCAGAGCTTCTGTGCCCTGATAGTCTTGCGACCACGGCCCTCGGCCTCGTAC 2588882
Query 81133 TTGGCGTAAGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTT 81191
|| |||| | ||||||| | |||| | ||| | | |||| | |||||||||||
Sbjct 2588881 TTCTCGTACAGGGCCTCGAACTCATCGCCGTAGCAGT-CGGCGAGGCCAGGGCACTCGTT 2588823
Query 81192 AGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGAT 81251
|||||||||||| |||||| || ||||| ||| ||||||||| ||| || ||
Sbjct 2588822 GGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAAT 2588763
Query 81252 CCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAA 81311
||||||||| ||||||||| ||| ||| ||||||| | || ||||| ||| |
Sbjct 2588762 CCAGAGGGCCAGGAACAGGTCACGGGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGGAG 2588703
Query 81312 CTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTT 81371
|| || || || | || |||| ||||| ||||| || || | ||| | | ||
Sbjct 2588702 GTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGG 2588643
Query 81372 GCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGG 81428
||| ||||||||||| |||||| | |||||| ||| || ||||| | ||| ||
Sbjct 2588642 GCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATGGG 2588583
Query 81429 GATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CC 81486
| |||||| | || ||||| || || | || || || |||| || | |
Sbjct 2588582 CACGATACCGTTGGAGGTTCCGTTGGTTCCGGCAATGTAAGATCCAGTGGCACGGATGCG 2588523
Query 81487 TTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATG 81546
|| ||| |||||||| ||||| | | ||| || ||| || || || | |
Sbjct 2588522 GTGGGCGTTG--AGACCGATTCCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTGAGG 2588465
Query 81547 GTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATC 81606
|| || || || ||||| ||||| || | |||||||||| || ||| || || | |
Sbjct 2588464 GTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCAAGAAGAGAGC 2588405
Query 81607 TGAGGGCTTTTTGA--GCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGT 81664
||| || | || |||||| ||||| || || |||| ||||| |||| | |
Sbjct 2588404 TGA--GCCTGGGGAGTGCCGGCGTTGAAGAGGGTGGGGGAGGCGTGTGTGAAGAACTTCT 2588347
Query 81665 TTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAG 81724
||||| || ||||| || |||| | ||| || || ||||||| ||
Sbjct 2588346 GGGACATGTAGTTGTAGGTCTCAATGACCTTCTCGACATCATCGCCCCAGATACCGACAG 2588287
Query 81725 CTACACGCATAAACATGTACTGGGGCGTCTCG 81756
| |||||||| | ||||| ||| || |||||
Sbjct 2588286 CAACACGCATGATCATGTGCTGAGGTCTCTCG 2588255
Score = 86.0 bits (94), Expect = 7e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 80044 AGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGC 80103
|| ||||||||||| |||||||| || ||||||||| | |||||| || ||| |
Sbjct 2589985 AGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGCATGGAGGTGATC 2589926
Query 80104 TTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCC 80163
|| | | ||||||| |||| |||||||||||||| ||||| |||||| ||
Sbjct 2589925 TTGCCCATGGTGGGGTCACGCATGTGAATGTTCAGAGACTGGGACTGGTCGATGAAGGCA 2589866
Query 80164 CCACGATCTGCCGCCAT 80180
||||| || || |||||
Sbjct 2589865 CCACGGTCGGCGGCCAT 2589849
>seq5
Length=5891385
Score = 194 bits (214), Expect = 2e-44
Identities = 179/227 (79%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| |||||||||||||| || ||||||||||| |||||
Sbjct 1784164 ATGCAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCG 1784223
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| ||| | ||| | || || ||||||||||| || ||||| || || |||
Sbjct 1784224 GATACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAG 1784283
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || ||||| |||||||||| |||||| || | ||||| ||
Sbjct 1784284 CAGCGCCTGATCTTTGCCGGAAAGCAGCTCGAGGATGGTCGTACTCTCTCCGACTACAAC 1784343
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| || || || ||| | || ||||| |||||
Sbjct 1784344 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTCCGCCTTCGTGGTGG 1784390
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || || ||||| || || | || ||||||||
Sbjct 1784680 ATGCAGATCTTTGTCAAGACCCTCACGGGAAAGACCATCACATTGGAAGTTGAGTCGTCG 1784739
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || ||||| || |||||||||||||||||||| || || ||||||
Sbjct 1784740 GACACAATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCAG 1784799
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||||||||||| || ||||| | || ||||| | ||||| ||
Sbjct 1784800 CAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGAACCCTGTCTGACTACAAC 1784859
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||| || ||||| || | || | ||||| || || ||
Sbjct 1784860 ATCCAAAAGGAGTCGACTCTGCACTTGGTGCTCCGTCTCCGTGGAGG 1784906
Score = 149 bits (164), Expect = 7e-31
Identities = 162/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
|||||||| || ||||| ||||| || || || ||||| || || || | ||| |
Sbjct 1784464 GTCAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAATCGTCCGACACCATCGAC 1784523
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
||| | ||| | || ||||||||||||||||| || || || || ||||||||||| |||
Sbjct 1784524 AATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGTCTGATT 1784583
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|| || || ||||| || ||||||| || |||||| | ||||| || | || |||||
Sbjct 1784584 TTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGGAG 1784643
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||| || || || ||| | ||||| || |||||
Sbjct 1784644 TCCACCCTCCACCTTGTCCTTCGTCTGCGTGGTGG 1784678
Score = 122 bits (134), Expect = 1e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || ||||| ||||| ||||| || || || ||||||
Sbjct 1784908 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACGATTACGCTGGAAGTCGAGTCATCA 1784967
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| || || |||||||||||||| || || || ||||||
Sbjct 1784968 GACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 1785027
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || |||||||| ||||| | ||||||| || ||||| || || ||
Sbjct 1785028 CAGCGCCTGATCTTTGCTGGCAAGCAGTTGGAGGATGGCCGCACCCTGAGTGATTACAAC 1785087
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| || ||||| || ||||| || | || | ||||| || || || ||
Sbjct 1785088 ATTCAGAAGGAGTCTACTCTGCACTTGGTTCTCCGTCTCCGTGGCGGTCA 1785137
>seq1
Length=8787864
Score = 185 bits (204), Expect = 1e-41
Identities = 180/229 (79%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| |||||||| ||||| || |||||||| || |||||||| |||||
Sbjct 8578725 AATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTC 8578666
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||| | ||| | ||| | || || |||||||||||||||||||| || |||||
Sbjct 8578665 CGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 8578606
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583
|||||| || || || ||||| ||||| || ||||||| || ||||| ||| ||||| |
Sbjct 8578605 GCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGAGC-GACTACA 8578547
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||| ||||| || |||||||| || ||| |||| || || |||||
Sbjct 8578546 ACATCCAGAAGGAGTCGACTCTTCACCTGGTCCTGCGCCTCCGTGGTGG 8578498
>seq6
Length=3941639
Score = 120 bits (132), Expect = 3e-22
Identities = 138/183 (75%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| || ||||| || || |||||||| || || || ||||| ||||| || | |||
Sbjct 189388 CTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCAT 189329
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| ||| | ||| | || || |||||||||||||| || || || ||||||||||| ||
Sbjct 189328 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCT 189269
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592
|| || ||||| ||||| || ||||||| || ||||| ||| ||||| || |||| |
Sbjct 189268 GATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGA 189210
Query 27593 AGG 27595
|||
Sbjct 189209 AGG 189207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310307324560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |