Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq6 127 2e-24
>seq6
Length=3941639
Score = 127 bits (140), Expect = 2e-24
Identities = 273/405 (67%), Gaps = 20/405 (5%)
Strand=Plus/Minus
Query 30062 ACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118
||||| ||||| | ||||| ||||| || || || ||||| || ||| |
Sbjct 2631905 ACGTAGAACTGGGCAAACATG---TGGCAGGGCGGCAGGGCCATCTTCTTCAGGTCGGCG 2631849
Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT------GAGG 30172
||||||||||||| || ||||||||| | ||| | ||||| | | || || |
Sbjct 2631848 GGGTTCCAGGCGCTCATGATGATGCGGCGGTCGTAGGGGTTCGTGCGGAGCTTGTGGATG 2631789
Query 30173 TCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG 30232
|| ||||| ||||| || || ||| |||| |||||| | | |||| ||
Sbjct 2631788 ACCTCGGCG------AGCTGGTCGACGCCCTGGCCCGTGTAGTCGGTGCGGGCGTCCTTG 2631735
Query 30233 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30292
||||| || || || || | ||||||||| ||||| || || |||||||| || | ||
Sbjct 2631734 TACTCGGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACCTCG 2631675
Query 30293 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30352
| |||| | ||| ||| | || || | || |||||| |||||||||||||
Sbjct 2631674 CGGTGCGACAGGCCGGCGCCGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTG 2631615
Query 30353 ACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGACGAACCACAGCAGCTC 30411
|| || ||| || ||| || ||| ||||| || |||||||||||||||
Sbjct 2631614 ACGCCGGCCTCGGACAGCGACAGCGACGACGTGCTGCCCTC-GATGAACCACAGCAGCTC 2631556
Query 30412 CTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456
| ||||||||||||| ||||| | ||| ||||| || || ||
Sbjct 2631555 CGCCACGACGGCCTTGAGGAAGACGCGCTTCGTCGTTAGCAGCGG 2631511
Score = 114 bits (126), Expect = 1e-20
Identities = 144/195 (74%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 29849 CTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCG 29908
|| ||||| | | |||||| | ||||| ||||||| || | ||||||||| |||
Sbjct 2632184 CTCGGCTCGCGCGTGAGCTGCTCCCGCAGCGCGTCCACGTGGTCGACGTAGACGTGCGCG 2632125
Query 29909 TCTCCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTA 29967
|| |||| | ||| | || || ||||| | || || ||| |||| || |||||||
Sbjct 2632124 TCGCCCATGACGTGCGTCAGGCTG-CCCGGCACCAGGCCCGTGGCGTGCGCGATCATGTG 2632066
Query 29968 CGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCT 30027
||| || || | ||||||||| ||||| ||||| || || || |||||||| | ||||
Sbjct 2632065 CGTCAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCCAGGCCCATGTCGCAGGACCG 2632006
Query 30028 CTGGTAGAGCTGACA 30042
|||||||||||| ||
Sbjct 2632005 CTGGTAGAGCTGGCA 2631991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310335625196
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |