Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq6 127 2e-24 >seq6 Length=3941639 Score = 127 bits (140), Expect = 2e-24 Identities = 273/405 (67%), Gaps = 20/405 (5%) Strand=Plus/Minus Query 30062 ACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118 ||||| ||||| | ||||| ||||| || || || ||||| || ||| | Sbjct 2631905 ACGTAGAACTGGGCAAACATG---TGGCAGGGCGGCAGGGCCATCTTCTTCAGGTCGGCG 2631849 Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT------GAGG 30172 ||||||||||||| || ||||||||| | ||| | ||||| | | || || | Sbjct 2631848 GGGTTCCAGGCGCTCATGATGATGCGGCGGTCGTAGGGGTTCGTGCGGAGCTTGTGGATG 2631789 Query 30173 TCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG 30232 || ||||| ||||| || || ||| |||| |||||| | | |||| || Sbjct 2631788 ACCTCGGCG------AGCTGGTCGACGCCCTGGCCCGTGTAGTCGGTGCGGGCGTCCTTG 2631735 Query 30233 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30292 ||||| || || || || | ||||||||| ||||| || || |||||||| || | || Sbjct 2631734 TACTCGGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACCTCG 2631675 Query 30293 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30352 | |||| | ||| ||| | || || | || |||||| ||||||||||||| Sbjct 2631674 CGGTGCGACAGGCCGGCGCCGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTG 2631615 Query 30353 ACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGACGAACCACAGCAGCTC 30411 || || ||| || ||| || ||| ||||| || ||||||||||||||| Sbjct 2631614 ACGCCGGCCTCGGACAGCGACAGCGACGACGTGCTGCCCTC-GATGAACCACAGCAGCTC 2631556 Query 30412 CTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | ||||||||||||| ||||| | ||| ||||| || || || Sbjct 2631555 CGCCACGACGGCCTTGAGGAAGACGCGCTTCGTCGTTAGCAGCGG 2631511 Score = 114 bits (126), Expect = 1e-20 Identities = 144/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 29849 CTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCG 29908 || ||||| | | |||||| | ||||| ||||||| || | ||||||||| ||| Sbjct 2632184 CTCGGCTCGCGCGTGAGCTGCTCCCGCAGCGCGTCCACGTGGTCGACGTAGACGTGCGCG 2632125 Query 29909 TCTCCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTA 29967 || |||| | ||| | || || ||||| | || || ||| |||| || ||||||| Sbjct 2632124 TCGCCCATGACGTGCGTCAGGCTG-CCCGGCACCAGGCCCGTGGCGTGCGCGATCATGTG 2632066 Query 29968 CGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCT 30027 ||| || || | ||||||||| ||||| ||||| || || || |||||||| | |||| Sbjct 2632065 CGTCAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCCAGGCCCATGTCGCAGGACCG 2632006 Query 30028 CTGGTAGAGCTGACA 30042 |||||||||||| || Sbjct 2632005 CTGGTAGAGCTGGCA 2631991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310335625196