Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq6 114 1e-20 >seq6 Length=3941639 Score = 114 bits (126), Expect = 1e-20 Identities = 277/406 (68%), Gaps = 14/406 (3%) Strand=Plus/Plus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 |||||||| |||||||| || || | | |||| ||| || | |||||||||||||||| Sbjct 2631511 CCGCTGCTAACGACGAAGCGCGTCTTCCTCAAGGCCGTCGTGGCGGAGCTGCTGTGGTTC 2631570 Query 34283 GT-GAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGG--GGGGTGAAGATCTGGGAC 34339 | ||||| || ||| | | ||| || | || || || |||||||||||| Sbjct 2631571 ATCGAGGGCAGC-ACGTCGTCGCTGTCGCTGTC--CGAGGCCGGCGTCAAGATCTGGGAC 2631627 Query 34340 GCTCACGGGTCTCGAGACTTTCTGGAC-AAGCGGGGGT-TCCCATCTCGGGAGGAGGGCG 34397 | ||||||| || || || || ||| || || | || || || |||| |||| Sbjct 2631628 GGCAACGGGTCGCGCGAGTTCCTCGACGGCGCCGGCCTGTCGCA--CCGCGAGGTCGGCG 2631685 Query 34398 ACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA-TCGGGGGAGC 34456 || ||||||| |||||||| ||||||||| | |||||||| || ||||| || | | Sbjct 2631686 ACCTGGGCCCCGTCTACGGCTTCCAGTGGCGCCACTTTGGCGCCGAGTACAAGGACGCCC 2631745 Query 34457 GAAGCGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGTACGTGATCGACACCTTGAA 34515 | | | ||||| |||| ||||| | |||||||| || | | || ||| ||| | Sbjct 2631746 GCA-CCGACTACACGGGCCAGGGCGTCGACCAGCTCGCCG-AGGTCATCCACAAGCTCCG 2631803 Query 34516 GCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCT 34575 |||||| | ||| | | ||| | ||| |||| |||||||| || || Sbjct 2631804 CACGAACCCCTACGACCGCCGCATCATCATGAGCGCCTGGAACCCCGCCGACCTGAAGAA 2631863 Query 34576 GATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCG 34621 |||||| || || || ||||||| | ||| ||||||||| || Sbjct 2631864 GATGGCCCTGCCGCCCTGCCACATGTTTGCCCAGTTCTACGTCTCG 2631909 Score = 114 bits (126), Expect = 1e-20 Identities = 277/406 (68%), Gaps = 14/406 (3%) Strand=Plus/Minus Query 6724 CGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTT 6783 || ||||||||| ||| | ||||||| || || || |||||| || || Sbjct 2631909 CGAGACGTAGAACTGGGCAAACATGTGGCAGGGCGGCAGGGCCATCTTCTTCAGGTCGGC 2631850 Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGAT 6843 |||||||| |||| ||| | ||| | | ||| | |||||| | ||| ||| Sbjct 2631849 GGGGTTCCAGGCGCTCATGATGATGCGGCGGTCGTAGGGGTTCGTGCGGAGCTTGTGGAT 2631790 Query 6844 CACGTACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGA-TAC 6901 || | | || |||||||| | ||||| |||| ||||| | | || | || ||| Sbjct 2631789 GACCT-CGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCGG-TGCGGGCGTCCTTGTAC 2631732 Query 6902 TCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGA 6961 || || |||||||| | ||||||||| |||||||| ||||||| |||||| |||| || Sbjct 2631731 TCGGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACCTCGCGG 2631672 Query 6962 GATGGGA-ACCCCCGCTT-GTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCA 7019 || || | || || ||| || || || || ||||||| ||||||||||||| | Sbjct 2631671 --TGCGACAGGCCGGCGCCGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGA 2631614 Query 7020 CCCC--CCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTC-ACGAACCACAGCAGCT 7076 | || || | || ||| | | ||| || ||||| | |||||||||||||| Sbjct 2631613 CGCCGGCCTCG--GACAGCGACAGCGACGACGT-GCTGCCCTCGATGAACCACAGCAGCT 2631557 Query 7077 CCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122 || | || ||| |||| | | || || |||||||| |||||||| Sbjct 2631556 CCGCCACGACGGCCTTGAGGAAGACGCGCTTCGTCGTTAGCAGCGG 2631511 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/183 (73%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || || | |||||||| | || ||||| ||||||||||| || Sbjct 2631990 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTGGGCGTGCCCTTCAACATTGCCAG 2632049 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAG-CTGG 34754 ||||| ||||| ||| |||||||||| || | | ||| |||| || ||| || ||| Sbjct 2632050 CTACGCCCTGCTGACGCACATGATCGCGCACGCCACGGGCCTGGTGCC-GGGCAGCCTGA 2632108 Query 34755 TGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCA 34812 || |||| |||| || ||||| ||||| | ||||| | || ||| ||| || Sbjct 2632109 CGC--ACGTCATGGGCGACGCGCACGTCTACGTCGACCACGTGGACGCGCTGCGGGAGCA 2632166 Query 34813 GCT 34815 ||| Sbjct 2632167 GCT 2632169 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/183 (73%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 6530 AGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCA--ACGTAT 6587 ||||| ||| ||| || | ||||| | ||||| ||||| || |||| |||| Sbjct 2632169 AGCTGCTCCCGCAGCGCGTCCACGTGGTCGACGTAGACGTGCGCGTCGCCCATGACGT-- 2632112 Query 6588 GCACCAG-CTCCCCAGGAACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCG 6646 || ||| || ||| || |||| ||| | | || |||||||||| ||| ||||| ||| Sbjct 2632111 GCGTCAGGCTGCCC-GGCACCAGGCCCGTGGCGTGCGCGATCATGTGCGTCAGCAGGGCG 2632053 Query 6647 TAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGG 6706 || || ||||||||||| ||||| || | |||||||| | || || || ||||||||| Sbjct 2632052 TAGCTGGCAATGTTGAAGGGCACGCCCAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGG 2631993 Query 6707 CAG 6709 ||| Sbjct 2631992 CAG 2631990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262327157360