Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq6 114 1e-20
>seq6
Length=3941639
Score = 114 bits (126), Expect = 1e-20
Identities = 277/406 (68%), Gaps = 14/406 (3%)
Strand=Plus/Plus
Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282
|||||||| |||||||| || || | | |||| ||| || | ||||||||||||||||
Sbjct 2631511 CCGCTGCTAACGACGAAGCGCGTCTTCCTCAAGGCCGTCGTGGCGGAGCTGCTGTGGTTC 2631570
Query 34283 GT-GAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGG--GGGGTGAAGATCTGGGAC 34339
| ||||| || ||| | | ||| || | || || || ||||||||||||
Sbjct 2631571 ATCGAGGGCAGC-ACGTCGTCGCTGTCGCTGTC--CGAGGCCGGCGTCAAGATCTGGGAC 2631627
Query 34340 GCTCACGGGTCTCGAGACTTTCTGGAC-AAGCGGGGGT-TCCCATCTCGGGAGGAGGGCG 34397
| ||||||| || || || || ||| || || | || || || |||| ||||
Sbjct 2631628 GGCAACGGGTCGCGCGAGTTCCTCGACGGCGCCGGCCTGTCGCA--CCGCGAGGTCGGCG 2631685
Query 34398 ACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA-TCGGGGGAGC 34456
|| ||||||| |||||||| ||||||||| | |||||||| || ||||| || | |
Sbjct 2631686 ACCTGGGCCCCGTCTACGGCTTCCAGTGGCGCCACTTTGGCGCCGAGTACAAGGACGCCC 2631745
Query 34457 GAAGCGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGTACGTGATCGACACCTTGAA 34515
| | | ||||| |||| ||||| | |||||||| || | | || ||| ||| |
Sbjct 2631746 GCA-CCGACTACACGGGCCAGGGCGTCGACCAGCTCGCCG-AGGTCATCCACAAGCTCCG 2631803
Query 34516 GCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCT 34575
|||||| | ||| | | ||| | ||| |||| |||||||| || ||
Sbjct 2631804 CACGAACCCCTACGACCGCCGCATCATCATGAGCGCCTGGAACCCCGCCGACCTGAAGAA 2631863
Query 34576 GATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCG 34621
|||||| || || || ||||||| | ||| ||||||||| ||
Sbjct 2631864 GATGGCCCTGCCGCCCTGCCACATGTTTGCCCAGTTCTACGTCTCG 2631909
Score = 114 bits (126), Expect = 1e-20
Identities = 277/406 (68%), Gaps = 14/406 (3%)
Strand=Plus/Minus
Query 6724 CGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTT 6783
|| ||||||||| ||| | ||||||| || || || |||||| || ||
Sbjct 2631909 CGAGACGTAGAACTGGGCAAACATGTGGCAGGGCGGCAGGGCCATCTTCTTCAGGTCGGC 2631850
Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGAT 6843
|||||||| |||| ||| | ||| | | ||| | |||||| | ||| |||
Sbjct 2631849 GGGGTTCCAGGCGCTCATGATGATGCGGCGGTCGTAGGGGTTCGTGCGGAGCTTGTGGAT 2631790
Query 6844 CACGTACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGA-TAC 6901
|| | | || |||||||| | ||||| |||| ||||| | | || | || |||
Sbjct 2631789 GACCT-CGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCGG-TGCGGGCGTCCTTGTAC 2631732
Query 6902 TCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGA 6961
|| || |||||||| | ||||||||| |||||||| ||||||| |||||| |||| ||
Sbjct 2631731 TCGGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACCTCGCGG 2631672
Query 6962 GATGGGA-ACCCCCGCTT-GTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCA 7019
|| || | || || ||| || || || || ||||||| ||||||||||||| |
Sbjct 2631671 --TGCGACAGGCCGGCGCCGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGA 2631614
Query 7020 CCCC--CCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTC-ACGAACCACAGCAGCT 7076
| || || | || ||| | | ||| || ||||| | ||||||||||||||
Sbjct 2631613 CGCCGGCCTCG--GACAGCGACAGCGACGACGT-GCTGCCCTCGATGAACCACAGCAGCT 2631557
Query 7077 CCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122
|| | || ||| |||| | | || || |||||||| ||||||||
Sbjct 2631556 CCGCCACGACGGCCTTGAGGAAGACGCGCTTCGTCGTTAGCAGCGG 2631511
Score = 96.9 bits (106), Expect = 3e-15
Identities = 134/183 (73%), Gaps = 6/183 (3%)
Strand=Plus/Plus
Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695
|||||||||||| || || || | |||||||| | || ||||| ||||||||||| ||
Sbjct 2631990 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTGGGCGTGCCCTTCAACATTGCCAG 2632049
Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAG-CTGG 34754
||||| ||||| ||| |||||||||| || | | ||| |||| || ||| || |||
Sbjct 2632050 CTACGCCCTGCTGACGCACATGATCGCGCACGCCACGGGCCTGGTGCC-GGGCAGCCTGA 2632108
Query 34755 TGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCA 34812
|| |||| |||| || ||||| ||||| | ||||| | || ||| ||| ||
Sbjct 2632109 CGC--ACGTCATGGGCGACGCGCACGTCTACGTCGACCACGTGGACGCGCTGCGGGAGCA 2632166
Query 34813 GCT 34815
|||
Sbjct 2632167 GCT 2632169
Score = 96.9 bits (106), Expect = 3e-15
Identities = 134/183 (73%), Gaps = 6/183 (3%)
Strand=Plus/Minus
Query 6530 AGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCA--ACGTAT 6587
||||| ||| ||| || | ||||| | ||||| ||||| || |||| ||||
Sbjct 2632169 AGCTGCTCCCGCAGCGCGTCCACGTGGTCGACGTAGACGTGCGCGTCGCCCATGACGT-- 2632112
Query 6588 GCACCAG-CTCCCCAGGAACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCG 6646
|| ||| || ||| || |||| ||| | | || |||||||||| ||| ||||| |||
Sbjct 2632111 GCGTCAGGCTGCCC-GGCACCAGGCCCGTGGCGTGCGCGATCATGTGCGTCAGCAGGGCG 2632053
Query 6647 TAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGG 6706
|| || ||||||||||| ||||| || | |||||||| | || || || |||||||||
Sbjct 2632052 TAGCTGGCAATGTTGAAGGGCACGCCCAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGG 2631993
Query 6707 CAG 6709
|||
Sbjct 2631992 CAG 2631990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448262327157360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |