Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 8e-15 seq1 86.0 4e-12 >seq5 Length=5891385 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||||||||| || ||||| | |||||||| || || Sbjct 1784680 ATGCAGATCTTTGTCAAGACCCTCACGGGAAAGACCATCACATTGGAAGTTGAGTCGTCG 1784739 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| || || | || || || || Sbjct 1784740 GACACAATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCAG 1784799 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| || || || ||||| |||| || || | || |||||| Sbjct 1784800 CAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGAACCCTGTCTGACTACAAC 1784859 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| ||||| || Sbjct 1784860 ATCCAAAAGGAGTCGAC 1784876 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||| || ||||| ||||| || || ||||| || || | Sbjct 1784908 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACGATTACGCTGGAAGTCGAGTCATCA 1784967 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| || ||| | || || || || Sbjct 1784968 GACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 1785027 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||| ||||| || |||| || | ||||| | | ||||||||| Sbjct 1785028 CAGCGCCTGATCTTTGCTGGCAAGCAGTTGGAGGATGGCCGCACCCTGAGTGATTACAAC 1785087 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || ||||| || | || || ||| Sbjct 1785088 ATTCAGAAGGAGTCTACTCTGCACTTGGTT 1785117 >seq1 Length=8787864 Score = 86.0 bits (94), Expect = 4e-12 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| ||||| || ||||| ||||| || || ||||| || || || || || Sbjct 8578727 AAAATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACTATCACCCTTGAGGTGGAGTCT 8578668 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | || | || || ||||| || || | || || || Sbjct 8578667 TCCGACACCATCGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGAATTCCCCCGGA 8578609 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| | || || || ||||| || ||||| || | ||||| | |||| || Sbjct 8578608 CCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGAGCGACTA 8578549 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || || ||||| || Sbjct 8578548 CAACATCCAGAAGGAGTCGAC 8578528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009546446604