Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq6 120 2e-22
>seq6
Length=3941639
Score = 120 bits (132), Expect = 2e-22
Identities = 257/382 (67%), Gaps = 14/382 (4%)
Strand=Plus/Minus
Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407
|||||| || || || ||||| || ||| |||||||||||||| || ||||||
Sbjct 2631885 GTGGCAGGGCGGCAGGGCCATCTTCTTCAGGTCGGCGGGGTTCCAGGCGCTCATGATGAT 2631826
Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGAT------GAGGTCCACGGCGTTTTGCAGCTGATC 27461
||| | ||| | ||||| | | || || | || ||||| ||||| ||
Sbjct 2631825 GCGGCGGTCGTAGGGGTTCGTGCGGAGCTTGTGGATGACCTCGGCG------AGCTGGTC 2631772
Query 27462 CACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCA 27521
|| ||| |||| |||||| | |||| ||||||| || || || || | |||
Sbjct 2631771 GACGCCCTGGCCCGTGTAGTCGGTGCGGGCGTCCTTGTACTCGGCGCCAAAGTGGCGCCA 2631712
Query 27522 TTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTC 27581
||||| ||||| || || |||||||| || | || | |||| | ||| |||
Sbjct 2631711 CTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACCTCGCGGTGCGACAGGCCGGCGCCGTC 2631652
Query 27582 CAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTT 27641
| || || | || |||||| ||||||||||||| || || |||||| |||
Sbjct 2631651 GAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGCCGGCCTCGGACAGCGACAG 2631592
Query 27642 GGAGTTTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGA 27700
|| ||| ||||| || |||||||||||||||| ||||||||||||| ||||
Sbjct 2631591 CGACGACGTGCTGCCCTC-GATGAACCACAGCAGCTCCGCCACGACGGCCTTGAGGAAGA 2631533
Query 27701 CCCTCTTGGTCGTGAGGAGGGG 27722
| | ||| ||||| || || ||
Sbjct 2631532 CGCGCTTCGTCGTTAGCAGCGG 2631511
Score = 120 bits (132), Expect = 2e-22
Identities = 145/195 (74%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 27115 CTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCG 27174
|| ||||| | | |||||| | ||||| |||||||| || | ||||||||| |||
Sbjct 2632184 CTCGGCTCGCGCGTGAGCTGCTCCCGCAGCGCGTCCACGTGGTCGACGTAGACGTGCGCG 2632125
Query 27175 TCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTA 27233
|| |||| | ||| | || || ||||| | || || ||| |||| || |||||||
Sbjct 2632124 TCGCCCATGACGTGCGTCAGGCTG-CCCGGCACCAGGCCCGTGGCGTGCGCGATCATGTG 2632066
Query 27234 CGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCT 27293
||| || || | ||||||||| ||||| ||||| || || || |||||||| | ||||
Sbjct 2632065 CGTCAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCCAGGCCCATGTCGCAGGACCG 2632006
Query 27294 CTGGTAGAGCTGACA 27308
|||||||||||| ||
Sbjct 2632005 CTGGTAGAGCTGGCA 2631991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369507141456203
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |