Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 168 1e-36 seq5 150 4e-31 seq6 138 2e-27 seq7 87.8 4e-12 seq2 87.8 4e-12 >seq1 Length=8787864 Score = 168 bits (186), Expect = 1e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || ||||| || | || || || |||||||||||||| Sbjct 8578497 ACCACCACGGAGGCGCAGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCT 8578556 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || || ||||||| || || ||||| || Sbjct 8578557 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGG 8578616 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || || | ||||| ||||| |||| || || Sbjct 8578617 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCAC 8578676 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||| ||||||||||| | ||||| ||||| ||||||||||| Sbjct 8578677 CTCAAGGGTGATAGTCTTACCCGTAAGGGTCTTGACGAAGATCTGCATTTT 8578727 Score = 113 bits (124), Expect = 9e-20 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | ||| ||| | || ||| ||| |||||||||| | | |||||| Sbjct 4218869 AGGAGTTCCTGACCGAGGCTCTGCCCTGCGCTCTGCTCGGCATGAACTCCAACCTCATGA 4218928 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 ||| || || || ||||| || || ||| | |||| || || || ||||||| || | Sbjct 4218929 AGCAGTACATTGAGTTCGTCGCCGACCGTCTGCTCGTCGCCCTCGGCAACGAGAAGGTCT 4218988 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||||| |||||||||| || |||||| ||| || || || || || |||| Sbjct 4218989 ACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACT 4219048 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| ||||| ||| | || || |||| | ||||||| Sbjct 4219049 TCTTCGAGAAGCGCGTCGGTGACTACCAAAAGGCCGGTGT 4219088 Score = 87.8 bits (96), Expect = 4e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 168752 ATTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||||||| ||||| || || |||||||| |||||||||||||||||||||||| Sbjct 2431560 ATTAGTATAGTGGTCAGTATGCCAGCTTGTCACGCTGGAGACCGGGGTTCAATTCCCCGA 2431501 Query 168812 T 168812 | Sbjct 2431500 T 2431500 Score = 87.8 bits (96), Expect = 4e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 168752 ATTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||||||| ||||| || || |||||||| |||||||||||||||||||||||| Sbjct 5463673 ATTAGTATAGTGGTCAGTATGCCAGCTTGTCACGCTGGAGACCGGGGTTCAATTCCCCGA 5463732 Query 168812 T 168812 | Sbjct 5463733 T 5463733 >seq5 Length=5891385 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | ||| || || |||||||||||||| | Sbjct 1784391 ACCACCACGAAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1784332 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| || || || ||||||||||||| || || || || || Sbjct 1784331 GAGAGTACGACCATCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGGGG 1784272 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| |||||||| | || || | || || || ||||| | ||||| Sbjct 1784271 AATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTATCCGAGGACTCGAC 1784212 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | ||||| ||||| |||||||| Sbjct 1784211 CTCAAGAGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 1784164 Score = 149 bits (164), Expect = 1e-30 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || |||| || | || || || || |||||||| ||| Sbjct 1785135 ACCGCCACGGAGACGGAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCACT 1785076 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| | || || || |||||||||| || || ||||| || Sbjct 1785075 CAGGGTGCGGCCATCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGG 1785016 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||||||||||| |||||| ||||| || ||| | ||||| ||||| || | |||| Sbjct 1785015 GATACCCTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCGATCGTGTCTGATGACTCGA 1784957 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| || || |||||||| || |||| ||||| ||||| |||||||| Sbjct 1784956 CTTCCAGCGTAATCGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 1784908 Score = 145 bits (160), Expect = 2e-29 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || |||| || | || || ||||||||||||||||||| Sbjct 1784907 ACCTCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGA 1784848 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || || |||||||| | ||| || ||||| || Sbjct 1784847 CAGGGTTCGGCCGTCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGG 1784788 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || ||||||||||| || ||| ||||| || ||| | ||||| |||||||| | || | Sbjct 1784787 GATTCCCTCCTTGTCCTGAATC-TTGCTCTTCACGTTGTCGATTGTGTCCGACGACTCAA 1784729 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| | ||||| ||||| ||||| | ||||| || || |||||||| Sbjct 1784728 CTTCCAATGTGATGGTCTTTCCCGTGAGGGTCTTGACAAAGATCTGCAT 1784680 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| ||||| || || || | ||| || || || ||||||||||| | Sbjct 1784679 ACCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGA 1784620 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| || |||| ||| || || || || Sbjct 1784619 TAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCCGGGGG 1784560 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| | || || | ||||| ||||| || | ||| || Sbjct 1784559 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGATTCCAC 1784500 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 ||||| ||||| ||||| || || | ||||| |||| Sbjct 1784499 CTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGA 1784462 >seq6 Length=3941639 Score = 138 bits (152), Expect = 2e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||||||||| || || || || || |||||| Sbjct 189209 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATC 189268 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || || ||||| || |||||||||||||| |||||||| | || || | ||| Sbjct 189269 AGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 189328 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| |||| || || ||||| ||||| ||||| ||||||| ||||| ||||| Sbjct 189329 ATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 189387 >seq7 Length=2844112 Score = 87.8 bits (96), Expect = 4e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 168752 ATTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||||||| ||||| || || |||||||| |||||||||||||||||||||||| Sbjct 1970169 ATTAGTATAGTGGTCAGTATGCCAGCTTGTCACGCTGGAGACCGGGGTTCAATTCCCCGA 1970228 Query 168812 T 168812 | Sbjct 1970229 T 1970229 >seq2 Length=7440894 Score = 87.8 bits (96), Expect = 4e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 168752 ATTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||||||| ||||| || || |||||||| |||||||||||||||||||||||| Sbjct 5018110 ATTAGTATAGTGGTCAGTATGCCAGCTTGTCACGCTGGAGACCGGGGTTCAATTCCCCGA 5018169 Query 168812 T 168812 | Sbjct 5018170 T 5018170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739025652502