Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq5 132 3e-26
seq1 132 3e-26
seq6 111 1e-19
>seq5
Length=5891385
Score = 132 bits (146), Expect = 3e-26
Identities = 157/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| ||||||||||| |||| ||| || | || ||
Sbjct 1784372 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCATCCTCG 1784313
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||||| ||||||||||| | || | |||||||| |||
Sbjct 1784312 AGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGG 1784253
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | ||||| || | ||| || ||||| | || || ||||
Sbjct 1784252 ATCTTGGACTTGACATTGT--CAATGGTATCCGAGGACTCGACCTCAAGAGTGATGGTCT 1784195
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || |||||||| |||||||| |||||
Sbjct 1784194 TGCCGGTAAGGGTCTTGACGAAGATCTGCAT 1784164
Score = 132 bits (146), Expect = 3e-26
Identities = 151/201 (75%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| || |||||||| |||| || ||| | || ||
Sbjct 1784660 ACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCCTCA 1784601
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| || |||| |||||||||||| | || | || ||||| |||
Sbjct 1784600 AGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGA 1784541
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| || ||| | |||||||||| ||||||||||| | || || ||||
Sbjct 1784540 ATCTTCGACTTGACATTGT--CGATGGTGTCGGACGATTCCACCTCGAGGGTGATGGTCT 1784483
Query 44307 TTCCCGTGAGGGTCTTCACGA 44327
|||| ||||||||||| ||||
Sbjct 1784482 TTCCGGTGAGGGTCTTGACGA 1784462
Score = 127 bits (140), Expect = 1e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| || || |||||||||||||||||| || | || || |||| ||
Sbjct 1784889 CACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTTCGGCCGTCCTC 1784830
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| || |||||||| | ||||||||| || | || | || ||||| |||
Sbjct 1784829 CAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTG 1784770
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | || ||||| | || || || |||| || || |||||
Sbjct 1784769 AATCTTGCTCTTCACGTTGTCGATTGTGTCCGACGACTCAACTTCCAATGTGATGGTCTT 1784710
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||||||||| || ||||| |||||
Sbjct 1784709 TCCCGTGAGGGTCTTGACAAAGATCTGCAT 1784680
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || || |||||| || ||||||||||| || ||| | || |||
Sbjct 1785116 ACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCACTCAGGGTGCGGCCATCCTCC 1785057
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
| |||||| || |||||||||| |||||||| || | || | ||| ||||| |||
Sbjct 1785056 AACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 1784997
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || ||||| | || || || |||| |||||||||||||
Sbjct 1784996 ATCTTGCTCTTGACGTTGTCGATCGTGTCTGATGACTCGACTTCCAGCGTAATCGTCTTT 1784937
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||||||| ||||| || |||||
Sbjct 1784936 CCGGTCAGGGTCTTGACGAAAATCTGCAT 1784908
>seq1
Length=8787864
Score = 132 bits (146), Expect = 3e-26
Identities = 157/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||||||||| || |||||| ||||||||||| ||| || ||| | || |||
Sbjct 8578516 ACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCC 8578575
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||||| |||||||| || | || | || ||||| |||
Sbjct 8578576 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 8578635
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | |||||||||| || |||||||| | || || ||||
Sbjct 8578636 ATCTTGGACTTGACATTGT--CGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCT 8578693
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||| |||||||| |||||||| |||||
Sbjct 8578694 TACCCGTAAGGGTCTTGACGAAGATCTGCAT 8578724
>seq6
Length=3941639
Score = 111 bits (122), Expect = 1e-19
Identities = 136/184 (74%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| ||| || ||| | || || |||||||| || || ||||
Sbjct 189207 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGA 189266
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| |||||||| || | || | ||| ||||| ||| ||||| ||| || |||
Sbjct 189267 TCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 189326
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||||| || |||||||| | || || ||||| ||||| |||||||||||
Sbjct 189327 --CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 189384
Query 44326 GAAG 44329
||||
Sbjct 189385 GAAG 189388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990342964021
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |