Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq5 156 1e-32
seq6 138 3e-27
seq1 134 3e-26
>seq5
Length=5891385
Score = 156 bits (172), Expect = 1e-32
Identities = 154/199 (77%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || ||||| ||||| || |||||||||||||||||| || ||||||||||
Sbjct 1784462 TCGTCAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAATCGTCCGACACCATCG 1784521
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| || ||||| |||||||||||||| || || ||||| ||||| ||||| || || |
Sbjct 1784522 ACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGTCTGA 1784581
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
| ||||||||||| ||||| || ||||| | || || |||| || ||| | || || |
Sbjct 1784582 TTTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGG 1784641
Query 178111 AATCAACACTGCATCTTGT 178129
| || || || || |||||
Sbjct 1784642 AGTCCACCCTCCACCTTGT 1784660
Score = 123 bits (136), Expect = 6e-23
Identities = 151/205 (74%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || ||||| ||||| || ||||| | || || || || |||
Sbjct 1784683 CAGATCTTTGTCAAGACCCTCACGGGAAAGACCATCACATTGGAAGTTGAGTCGTCGGAC 1784742
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || |||||||||||||| || |||||||| |||||||||||
Sbjct 1784743 ACAATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCAGCAG 1784802
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||||| || || || | || || | || || ||| ||
Sbjct 1784803 CGTCTCATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGAACCCTGTCTGACTACAACATC 1784862
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| || || || ||||| ||||
Sbjct 1784863 CAAAAGGAGTCGACTCTGCA-CTTG 1784886
Score = 123 bits (136), Expect = 6e-23
Identities = 153/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || || || ||||| ||||| || || || || || ||||||
Sbjct 1784911 CAGATTTTCGTCAAGACCCTGACCGGAAAGACGATTACGCTGGAAGTCGAGTCATCAGAC 1784970
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| |||||||| || || ||||| |||||||||||
Sbjct 1784971 ACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 1785030
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||| | || ||||| | || || ||||| ||| |
Sbjct 1785031 CGCCTGATCTTTGCTGGCAAGCAGTTGGAGGATGGCCGCACCCTGAGTGATTACAACATT 1785090
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| || || || || ||||| |||| ||
Sbjct 1785091 CAGAAGGAGTCTACTCTGCA-CTTGGTT 1785117
>seq6
Length=3941639
Score = 138 bits (152), Expect = 3e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
|||||||| || || || || || || ||||||||||||||||| || |||||||||
Sbjct 189387 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATC 189328
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| |||||||| || || ||||| ||||||||||| || ||
Sbjct 189327 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTG 189268
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
|||||||| ||||| ||||| || ||||| | || || ||| || ||| |||| ||
Sbjct 189267 ATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 189209
>seq1
Length=8787864
Score = 134 bits (148), Expect = 3e-26
Identities = 159/215 (74%), Gaps = 3/215 (1%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || ||||| || || || || || || || |||||||| ||||||||
Sbjct 8578727 AAAATGC---AGATCTTCGTCAAGACCCTTACGGGTAAGACTATCACCCTTGAGGTGGAG 8578671
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| ||||||||||| || ||||| ||||| |||||||| || ||||| || |||
Sbjct 8578670 TCTTCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCG 8578611
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|||||||| || || |||||||| || || ||||| || ||||| | || || |||
Sbjct 8578610 GACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGAGCGAC 8578551
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| ||| |||| || || || || || || || ||
Sbjct 8578550 TACAACATCCAGAAGGAGTCGACTCTTCACCTGGT 8578516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730999503522
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |