Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 6e-31
seq5 138 1e-27
seq6 118 1e-21
>seq1
Length=8787864
Score = 149 bits (164), Expect = 6e-31
Identities = 175/235 (74%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692
|| || || || || || | ||||| || || || ||||||||| ||||| ||||||
Sbjct 8578495 CCACCACCACGGAGGCGCAGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCG 8578554
Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752
|||||||| | || || ||||||||||| ||||| ||||||||||| ||||||| |
Sbjct 8578555 CTCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGG 8578614
Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACT 41810
|||| | |||||||||| ||| || ||| || | || | |||||| ||||
Sbjct 8578615 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCGGAAGACT 8578672
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||||||| | || || || |||||||| || ||||| ||||| |||||||| ||
Sbjct 8578673 CCACCTCAAGGGTGATAGTCTTACCCGTAAGGGTCTTGACGAAGATCTGCATTTT 8578727
Score = 87.8 bits (96), Expect = 2e-12
Identities = 117/160 (73%), Gaps = 2/160 (1%)
Strand=Plus/Minus
Query 85800 CGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTC 85859
|| ||||| || || |||||||| ||| ||||||| |||||| |||||| || |||
Sbjct 1569893 CGCATCGCCCCCCGCTCCGGCCTGGCCGCCAAGCACTTCATCGACACGGGCGCGGGCGTC 1569834
Query 85860 ATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGAAGAGGAT 85919
||||||||||||||||| || | |||| | | || ||||||||| |||| | ||
Sbjct 1569833 ATCGACGCCGACTACCGGGGCCAGGTCAAGGTACTGCTGTTCAACCACAGCGACGCCGAC 1569774
Query 85920 CTGGTCGTGAGGCGA-GGAGACAAGGTGGCCCAGTTCATC 85958
| | |||| |||| || ||| || |||||| || ||
Sbjct 1569773 TTTGCGGTGA-GCGAGGGCGACCGCGTCGCCCAGCTCGTC 1569735
>seq5
Length=5891385
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || ||||| | |||| ||||| || ||||||||||||||| || ||
Sbjct 1785134 CCGCCACGGAGACGGAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCACTC 1785075
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || | ||||||||| || || ||||||||||| ||||||| |||
Sbjct 1785074 AGGGTGCGGCCATCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 1785015
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| || ||| ||| | | | ||||| ||||| ||
Sbjct 1785014 ATACCCTCCTTGTCCTGGATCTTGCTCTT-GACGTTGTCGATCGTGTCTGATGACTCGAC 1784956
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| ||| ||||| || || ||||| ||||| ||||||||||||||
Sbjct 1784955 TTCCAGCGTAATCGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 1784908
Score = 132 bits (146), Expect = 4e-26
Identities = 164/220 (75%), Gaps = 6/220 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || || ||| ||||||||||||||| ||||||||
Sbjct 1784678 CCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAT 1784619
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || |||||||| |||||||| ||||| ||||| || |||| |||
Sbjct 1784618 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCCGGGGGG 1784559
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812
| || |||||||||| ||| | || | ||| || | || | |||||| ||| |||
Sbjct 1784558 ATGCCCTCCTTGTCC-TGAATCTTCGACTTGACATTGTCG--ATGGTGTCGGACGATTCC 1784502
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852
||||| | || || || || || || || ||||| ||||
Sbjct 1784501 ACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGA 1784462
Score = 122 bits (134), Expect = 8e-23
Identities = 173/241 (72%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || || || || ||| ||||||||| ||||| |||||||||
Sbjct 1784390 CCACCACGAAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1784331
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || ||||||||||| ||||| || ||||||||||| || |||| ||||
Sbjct 1784330 AGAGTACGACCATCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGGGGA 1784271
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || ||||||||| ||| || ||| || | | | || || ||||| ||
Sbjct 1784270 ATGCCTTCCTTGTCCTGGATCTTGGACTT-GACATTGTCAATGGTATCCGAGGACTCGAC 1784212
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATCGATGGA 41874
||| | || || || || || || || ||||| ||||| |||||||| |||||||
Sbjct 1784211 CTCAAGAGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCATCGCGGCGATGGA 1784152
Query 41875 T 41875
|
Sbjct 1784151 T 1784151
>seq6
Length=3941639
Score = 118 bits (130), Expect = 1e-21
Identities = 137/183 (75%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||| |||||||| | || || |||||||| || ||||| |
Sbjct 189207 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGA 189266
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
|||||||||| ||||||| ||| | | |||||||||| ||| || ||| || |
Sbjct 189267 TCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 189326
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | |||||| ||||||||||| | || || || || |||||||| ||||| ||
Sbjct 189327 CG--ATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 189384
Query 41851 GAA 41853
|||
Sbjct 189385 GAA 189387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303924875600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |