Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1 149 6e-31 seq5 138 1e-27 seq6 118 1e-21 >seq1 Length=8787864 Score = 149 bits (164), Expect = 6e-31 Identities = 175/235 (74%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || || || | ||||| || || || ||||||||| ||||| |||||| Sbjct 8578495 CCACCACCACGGAGGCGCAGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCG 8578554 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 |||||||| | || || ||||||||||| ||||| ||||||||||| ||||||| | Sbjct 8578555 CTCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGG 8578614 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACT 41810 |||| | |||||||||| ||| || ||| || | || | |||||| |||| Sbjct 8578615 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCGGAAGACT 8578672 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||||| | || || || |||||||| || ||||| ||||| |||||||| || Sbjct 8578673 CCACCTCAAGGGTGATAGTCTTACCCGTAAGGGTCTTGACGAAGATCTGCATTTT 8578727 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 85800 CGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTC 85859 || ||||| || || |||||||| ||| ||||||| |||||| |||||| || ||| Sbjct 1569893 CGCATCGCCCCCCGCTCCGGCCTGGCCGCCAAGCACTTCATCGACACGGGCGCGGGCGTC 1569834 Query 85860 ATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGAAGAGGAT 85919 ||||||||||||||||| || | |||| | | || ||||||||| |||| | || Sbjct 1569833 ATCGACGCCGACTACCGGGGCCAGGTCAAGGTACTGCTGTTCAACCACAGCGACGCCGAC 1569774 Query 85920 CTGGTCGTGAGGCGA-GGAGACAAGGTGGCCCAGTTCATC 85958 | | |||| |||| || ||| || |||||| || || Sbjct 1569773 TTTGCGGTGA-GCGAGGGCGACCGCGTCGCCCAGCTCGTC 1569735 >seq5 Length=5891385 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | |||| ||||| || ||||||||||||||| || || Sbjct 1785134 CCGCCACGGAGACGGAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCACTC 1785075 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || | ||||||||| || || ||||||||||| ||||||| ||| Sbjct 1785074 AGGGTGCGGCCATCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 1785015 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| ||| | | | ||||| ||||| || Sbjct 1785014 ATACCCTCCTTGTCCTGGATCTTGCTCTT-GACGTTGTCGATCGTGTCTGATGACTCGAC 1784956 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||| ||||| || || ||||| ||||| |||||||||||||| Sbjct 1784955 TTCCAGCGTAATCGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 1784908 Score = 132 bits (146), Expect = 4e-26 Identities = 164/220 (75%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| ||||||||||||||| |||||||| Sbjct 1784678 CCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAT 1784619 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || |||||||| |||||||| ||||| ||||| || |||| ||| Sbjct 1784618 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCCGGGGGG 1784559 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | || |||||||||| ||| | || | ||| || | || | |||||| ||| ||| Sbjct 1784558 ATGCCCTCCTTGTCC-TGAATCTTCGACTTGACATTGTCG--ATGGTGTCGGACGATTCC 1784502 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||||| | || || || || || || || ||||| |||| Sbjct 1784501 ACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGA 1784462 Score = 122 bits (134), Expect = 8e-23 Identities = 173/241 (72%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || || ||| ||||||||| ||||| ||||||||| Sbjct 1784390 CCACCACGAAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1784331 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || ||||||||||| ||||| || ||||||||||| || |||| |||| Sbjct 1784330 AGAGTACGACCATCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGGGGA 1784271 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| || ||| || | | | || || ||||| || Sbjct 1784270 ATGCCTTCCTTGTCCTGGATCTTGGACTT-GACATTGTCAATGGTATCCGAGGACTCGAC 1784212 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATCGATGGA 41874 ||| | || || || || || || || ||||| ||||| |||||||| ||||||| Sbjct 1784211 CTCAAGAGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCATCGCGGCGATGGA 1784152 Query 41875 T 41875 | Sbjct 1784151 T 1784151 >seq6 Length=3941639 Score = 118 bits (130), Expect = 1e-21 Identities = 137/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| |||||||| | || || |||||||| || ||||| | Sbjct 189207 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGA 189266 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 |||||||||| ||||||| ||| | | |||||||||| ||| || ||| || | Sbjct 189267 TCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 189326 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | |||||| ||||||||||| | || || || || |||||||| ||||| || Sbjct 189327 CG--ATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 189384 Query 41851 GAA 41853 ||| Sbjct 189385 GAA 189387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303924875600