Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq689 127 4e-24 seq95 109 1e-18 >seq689 Length=208963 Score = 127 bits (140), Expect = 4e-24 Identities = 317/474 (67%), Gaps = 12/474 (3%) Strand=Plus/Minus Query 230182 CGTCTCGTCGCCTGGG-TGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CCA 230239 |||||||| || | | || | ||||| ||||| | || || || ||| ||| ||| Sbjct 94361 CGTCTCGTTGCTTTTGCTGCG-GTTGAGGGTATCTTCTTCTCGGGTTCTTT-TGCATCCA 94304 Query 230240 TCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCA 230299 |||| ||| || ||| ||| ||||||| || || | |||||||| || ||| Sbjct 94303 TCTTCTGGTTGAAGAAGCGCGGTATGATGCCGGGTCTTACATTCTCTAACGAATTGATCT 94244 Query 230300 GTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACA 230359 ||| || |||||||| || | || | | || | | || | || |||| Sbjct 94243 CTCGTGATGAGGGTCTGCACACTGATTTTGCCTGCCTCCTCTTCTCTCACCTT---AACA 94187 Query 230360 AGCTACCATTCGAGACGGTCAAACAAATCATTA---CAGAAGCAGTTGAAAACGAAAAGG 230416 | | |||| ||| ||||| ||| ||||| | || || ||||||| |||| | | Sbjct 94186 ACCGCCCATCGAAGAAGGTCATCCAAGACATTATCACCGAGGCTGTTGAAATCGAACAAG 94127 Query 230417 AGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGAC 230476 | ||| | ||| ||| |||||||| | || | |||||||||||| || ||| | Sbjct 94126 AATTCTTGACTGATGCTCTTCCATGTGGTCTCCTCGGCATGAACGCTACTCTCATGAAGC 94067 Query 230477 AGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACA 230536 | |||||||| || || |||||| | | | | || || ||| || |||| | |||| Sbjct 94066 AATACATCGAGTTTGTTGCCGACAGACTCCTCATCGCTCTCGGTAACCAGAAGTTCTACA 94007 Query 230537 ACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCT 230596 |||| | ||||| || | || ||||| ||| || ||| || ||||| ||||||| Sbjct 94006 ACTCCACCAACCCATTCGACTTCATGGAAAACATCTCCCTTGCTGGAAAGACAAACTTCT 93947 Query 230597 TCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG--AAGCCCGAAGA 230648 | || |||||||| |||| || || | | | ||||| ||| |||| | |||| Sbjct 93946 TTGAGAAGCGTGTTGGTGATTACCAAAAGGCCGGTGTCATGGCAAGCACAAAGA 93893 >seq95 Length=51392 Score = 109 bits (120), Expect = 1e-18 Identities = 186/269 (69%), Gaps = 3/269 (1%) Strand=Plus/Plus Query 319401 CTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATG 319460 ||||||||| | | || || |||||||| |||||| || |||||||||| Sbjct 37810 CTTCACGAAAGCTGCCAAGTTACCCTTGTAACAGACCAGCTTC---TTCTGTTCGTAATG 37866 Query 319461 GATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGA 319520 | ||| ||| || || | || | ||| || |||||||| || ||||||| ||| Sbjct 37867 GTAGATATCGGTACAGACTTCATCCAAGAATCCAGAGTCGTGAGAAACAATCAAAGACGT 37926 Query 319521 AACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATG 319580 | || || | || | || ||||| |||||| | || || | ||| ||||| Sbjct 37927 GATCTCGGTATGTTTCTTGAGATATTCTTGCAACCATTTGACATTGGCAACATCGAGATG 37986 Query 319581 GTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 319640 |||||| || ||||||||||| || | | ||| | || ||||| ||||| ||||| || Sbjct 37987 GTTGGTAGGTTCGTCAAGAAGGAGAACATCTGCATCCAACAGCATAGCACGGGCAAGTGC 38046 Query 319641 GAGTTTCATTTTCCACCCTCCGGAAAGAG 319669 | ||||||||||| ||||| || |||| Sbjct 38047 CAACTTCATTTTCCAACCTCCAGATAGAG 38075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057814485534260