Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq698 223 4e-53 seq689 147 3e-30 >seq698 Length=89367 Score = 223 bits (246), Expect = 4e-53 Identities = 644/980 (66%), Gaps = 32/980 (3%) Strand=Plus/Plus Query 53711 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 53770 || || ||||| ||||| || || |||| | | | | || | || || || || || Sbjct 2169 GAAGCGAGATTGCAAACAGCGACTTCATCTGGAGCAGTGTACTCAATAATTTCGGTACAC 2228 Query 53771 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 53830 | ||| | |||||| || || || || | |||||| |||||| ||| || |||||| Sbjct 2229 AAGTTAGAGCTCTTGATAGTACCCAAGTTCTTTTGATTGCTCTTTCGGTTGCAGGCATCC 2288 Query 53831 TTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACG 53890 || || || |||||||| | ||||| || |||| | || | || || | ||| | Sbjct 2289 TTGTAGAGCATGAATGGATTTCCAGTCTCGGTCTGTGCCTCGAGGATAGCGTACCAAAGC 2348 Query 53891 ACACGAGCCTTTATTATAGATTTGT--ATCTCTTTTCTCTT--TCGTATAGTGTATACAA 53946 |||| || || | || || | | | ||||| |||||| | ||| | Sbjct 2349 TTTTGAGCTTTCAT----GGTTCGTCGACCACGCCCCTCTTGTTCGTATTTGGCATAAAG 2404 Query 53947 TCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAA 54006 ||||| || ||||| | || | | | | || ||| |||| || || | ||| Sbjct 2405 GACCTCAAATTCATCTCCATAGACGTCGGCTAGACCTGGAGCCTCATGAGGGCAGAACAA 2464 Query 54007 CGACCACTCTCCGTCATCCTTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 54063 | ||||||| | || ||| |||||||||||||| |||||||||||||||||||| Sbjct 2465 AGTCCACTCT---TGATTCTTTTCAACTCGTTTCATAAAAAGATCAGGAATCCAAAGAGC 2521 Query 54064 TATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 54122 ||| || || || | | || ||| || || || ||||| || || |||| Sbjct 2522 -ATAGAAAAGGTCACGAGCTCGTACTTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGA 2580 Query 54123 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGT 54182 | | | || || || ||||| || || | ||| |||| | | | || || ||||||| Sbjct 2581 ATTCGAAAACGTCCGAGTGCCATGGCTCAAGGTAAATGGCAAAAGCACCTGGTCGTTTGT 2640 Query 54183 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 54242 | || ||||| || | ||||||||| ||||| || | || | | ||| |||| ||||| Sbjct 2641 TGCCACCCTGGTCAACGTATCTAGCAGTGTTGTTGAACACGCGGAGCATGGGAACAATAC 2700 Query 54243 CATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTG 54302 | ||||| | |||||| |||||| || || ||| |||| ||||| | ||| Sbjct 2701 CGTTGGAAGAACCATTAGTCCCGCCAATGTAAGAGCCAGTGGCTCGAATTCTGTGAATGT 2760 Query 54303 ATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 54362 ||||| || || || || | || ||||| | || || || || |||||||||| Sbjct 2761 TGAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTCAAAGTATCATAGA 2820 Query 54363 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 54422 | || || ||||| || || |||||| | | || || ||||| || | || Sbjct 2821 TTCCTTCGATACTGTCCTCTTTCATGTCGATCAAGAAGCATGAGGACATCTGAGGCTGAG 2880 Query 54423 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA--GAAAGTAG 54480 ||| || ||||| || | ||| || |||||||| || || | |||| || | || Sbjct 2881 GAGTACCAGCATTGAAAAGGGTTGGGGAAGCGTGGGTGAA--TGTCTTCAACGACAAAAG 2938 Query 54481 ATTGTACGTCTC---GATA-GCTGA--GTCTATATCCCATTGATGAATTCCTACTGCGAC 54534 ||||| || || || | | | | ||| | |||| || || || || || Sbjct 2939 CTTGTAGGTTTCCAAGACACGTTCAATGTCATCACCCCA------GATACCAACAGCAAC 2992 Query 54535 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGA 54594 |||||| | |||||| || |||| ||| | |||||| || || || | ||| || Sbjct 2993 ACGCATCAGCATGTGTTGTGGTCGCTCAGCTGGCTTGTTACCAATCTTGAGTAGGTATGA 3052 Query 54595 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 54654 | |||||| || || ||||||||||| | || |||||||| ||||| | ||| | Sbjct 3053 TCTTTCCATTGTCTTGAAACCAAAATATTGATAGTTAAAGTCTCTGTCGTAGACGATAGC 3112 Query 54655 TGAGTTGAGTTTATCCTTAT 54674 ||||||| || ||||| || Sbjct 3113 CGAGTTGAATTCATCCTCAT 3132 >seq689 Length=208963 Score = 147 bits (162), Expect = 3e-30 Identities = 552/853 (65%), Gaps = 16/853 (2%) Strand=Plus/Plus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| ||||| ||||| || || || || || || || || | | || || ||| Sbjct 93919 TTTTGGTAATCACCAACACGCTTCTCAAAGAAGTTTGTCTTTCCAGCAAGGGAGATGTTT 93978 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAA-AT 23962 |||||||| ||| |||| ||||| || |||| ||| | | || | || | Sbjct 93979 TCCATGAAGTCGAATGGGTTGGTGGAGTTGTAGAA-CTTCTGGTTACCGAGAGCGATGAG 94037 Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022 | ||| || || |||||||| || ||| ||||| | | ||||| || | || Sbjct 94038 GAGTCTGTCGGCAACAAACTCGATGTATTGCTTCATGAGAGTAGCGTTCATGCCGAGGAG 94097 Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082 | ||||||||| |||| | ||||||||||| || || || || || ||||| Sbjct 94098 ACCACATGGAAGAGCATCAGTCAAGAATTCTTGTTCGATTTCAACAGCCTCGGTGATAAT 94157 Query 24083 AGATCTTAC-TGT--TTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 24139 |||| || |||||| | || || | | | || || | | || || Sbjct 94158 G--TCTTGGATGACCTTCTTCGATGGGCGGTTGTTA-AGGTGAGAGAAGAGGAGGCAGGC 94214 Query 24140 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 24199 ||||| ||| |||||||| || | | || |||||||| || || || || || || Sbjct 94215 AAAATCAGTGTGCAGACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTAAGACCCGG 94274 Query 24200 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 24259 ||| | || ||||| || | ||| || ||||| ||||| || || || ||||| || || Sbjct 94275 CATCATACCGCGCTTCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAGATACC 94334 Query 24260 TTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG-CT--GTCATGTATCCA 24316 || || || ||||| |||| || | || | ||| | || ||| || ||||| Sbjct 94335 CTCAACCGCAGCAAAAGCAACGAGACGTTGAGCGAAACAAGATTCTTGGTCTTGAATCCA 94394 Query 24317 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376 | ||||||||||||||||| | ||| || || || || || |||| || | Sbjct 94395 GTGAATGGCCCAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCATCGAACAA 94454 Query 24377 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 24436 || || | | || || |||| ||||| || || | |||| || | || || Sbjct 94455 GTATGTTCTCTGCTTTGGCTCCTTAATGTATGTGTCGATGAGAAGAGAGTATGTCTCTGA 94514 Query 24437 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 24496 || ||||| || || || || || |||||||| |||| || || | | ||| || Sbjct 94515 GTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCTGGGACCTGAAC 94574 Query 24497 TTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 24556 ||| | | || ||||| | || || |||||||| || || || || ||||| || Sbjct 94575 TTCACCAGAGAAACGTTCGACCAAGTTCTCATTCACAATACCATCTGAAGCGGCAAAGAA 94634 Query 24557 CGCCAATACATGTTTTATAAAATA---TTTTTCGTC-TGGTGTTAGTTTATTCCAATCAT 24612 || | ||||| || || || | ||||| | | | | || ||||| || | Sbjct 94635 GGCAAGAACATGGGAGATGAAGTAGCGCTCATCGTCATTGAG-GCGATTGTTCCAGTCGT 94693 Query 24613 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 24672 | ||| || || | ||| | ||||| | ||||| ||||| || || ||||| || | Sbjct 94694 GAAGATCCTTTGACAGATCGATCTCTTCGGCAGTCCAGAATGAGGCTTCAGCCTTCTTGT 94753 Query 24673 ACATATTCCAGAT 24685 |||| | |||||| Sbjct 94754 ACATTTGCCAGAT 94766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593716390092960