Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq698 223 4e-53
seq689 147 3e-30
>seq698
Length=89367
Score = 223 bits (246), Expect = 4e-53
Identities = 644/980 (66%), Gaps = 32/980 (3%)
Strand=Plus/Plus
Query 53711 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 53770
|| || ||||| ||||| || || |||| | | | | || | || || || || ||
Sbjct 2169 GAAGCGAGATTGCAAACAGCGACTTCATCTGGAGCAGTGTACTCAATAATTTCGGTACAC 2228
Query 53771 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 53830
| ||| | |||||| || || || || | |||||| |||||| ||| || ||||||
Sbjct 2229 AAGTTAGAGCTCTTGATAGTACCCAAGTTCTTTTGATTGCTCTTTCGGTTGCAGGCATCC 2288
Query 53831 TTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACG 53890
|| || || |||||||| | ||||| || |||| | || | || || | ||| |
Sbjct 2289 TTGTAGAGCATGAATGGATTTCCAGTCTCGGTCTGTGCCTCGAGGATAGCGTACCAAAGC 2348
Query 53891 ACACGAGCCTTTATTATAGATTTGT--ATCTCTTTTCTCTT--TCGTATAGTGTATACAA 53946
|||| || || | || || | | | ||||| |||||| | ||| |
Sbjct 2349 TTTTGAGCTTTCAT----GGTTCGTCGACCACGCCCCTCTTGTTCGTATTTGGCATAAAG 2404
Query 53947 TCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAA 54006
||||| || ||||| | || | | | | || ||| |||| || || | |||
Sbjct 2405 GACCTCAAATTCATCTCCATAGACGTCGGCTAGACCTGGAGCCTCATGAGGGCAGAACAA 2464
Query 54007 CGACCACTCTCCGTCATCCTTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 54063
| ||||||| | || ||| |||||||||||||| ||||||||||||||||||||
Sbjct 2465 AGTCCACTCT---TGATTCTTTTCAACTCGTTTCATAAAAAGATCAGGAATCCAAAGAGC 2521
Query 54064 TATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 54122
||| || || || | | || ||| || || || ||||| || || ||||
Sbjct 2522 -ATAGAAAAGGTCACGAGCTCGTACTTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGA 2580
Query 54123 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGT 54182
| | | || || || ||||| || || | ||| |||| | | | || || |||||||
Sbjct 2581 ATTCGAAAACGTCCGAGTGCCATGGCTCAAGGTAAATGGCAAAAGCACCTGGTCGTTTGT 2640
Query 54183 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 54242
| || ||||| || | ||||||||| ||||| || | || | | ||| |||| |||||
Sbjct 2641 TGCCACCCTGGTCAACGTATCTAGCAGTGTTGTTGAACACGCGGAGCATGGGAACAATAC 2700
Query 54243 CATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTG 54302
| ||||| | |||||| |||||| || || ||| |||| ||||| | |||
Sbjct 2701 CGTTGGAAGAACCATTAGTCCCGCCAATGTAAGAGCCAGTGGCTCGAATTCTGTGAATGT 2760
Query 54303 ATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 54362
||||| || || || || | || ||||| | || || || || ||||||||||
Sbjct 2761 TGAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTCAAAGTATCATAGA 2820
Query 54363 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 54422
| || || ||||| || || |||||| | | || || ||||| || | ||
Sbjct 2821 TTCCTTCGATACTGTCCTCTTTCATGTCGATCAAGAAGCATGAGGACATCTGAGGCTGAG 2880
Query 54423 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA--GAAAGTAG 54480
||| || ||||| || | ||| || |||||||| || || | |||| || | ||
Sbjct 2881 GAGTACCAGCATTGAAAAGGGTTGGGGAAGCGTGGGTGAA--TGTCTTCAACGACAAAAG 2938
Query 54481 ATTGTACGTCTC---GATA-GCTGA--GTCTATATCCCATTGATGAATTCCTACTGCGAC 54534
||||| || || || | | | | ||| | |||| || || || || ||
Sbjct 2939 CTTGTAGGTTTCCAAGACACGTTCAATGTCATCACCCCA------GATACCAACAGCAAC 2992
Query 54535 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGA 54594
|||||| | |||||| || |||| ||| | |||||| || || || | ||| ||
Sbjct 2993 ACGCATCAGCATGTGTTGTGGTCGCTCAGCTGGCTTGTTACCAATCTTGAGTAGGTATGA 3052
Query 54595 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 54654
| |||||| || || ||||||||||| | || |||||||| ||||| | ||| |
Sbjct 3053 TCTTTCCATTGTCTTGAAACCAAAATATTGATAGTTAAAGTCTCTGTCGTAGACGATAGC 3112
Query 54655 TGAGTTGAGTTTATCCTTAT 54674
||||||| || ||||| ||
Sbjct 3113 CGAGTTGAATTCATCCTCAT 3132
>seq689
Length=208963
Score = 147 bits (162), Expect = 3e-30
Identities = 552/853 (65%), Gaps = 16/853 (2%)
Strand=Plus/Plus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|||||||| ||||| ||||| || || || || || || || || | | || || |||
Sbjct 93919 TTTTGGTAATCACCAACACGCTTCTCAAAGAAGTTTGTCTTTCCAGCAAGGGAGATGTTT 93978
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAA-AT 23962
|||||||| ||| |||| ||||| || |||| ||| | | || | || |
Sbjct 93979 TCCATGAAGTCGAATGGGTTGGTGGAGTTGTAGAA-CTTCTGGTTACCGAGAGCGATGAG 94037
Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022
| ||| || || |||||||| || ||| ||||| | | ||||| || | ||
Sbjct 94038 GAGTCTGTCGGCAACAAACTCGATGTATTGCTTCATGAGAGTAGCGTTCATGCCGAGGAG 94097
Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082
| ||||||||| |||| | ||||||||||| || || || || || |||||
Sbjct 94098 ACCACATGGAAGAGCATCAGTCAAGAATTCTTGTTCGATTTCAACAGCCTCGGTGATAAT 94157
Query 24083 AGATCTTAC-TGT--TTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 24139
|||| || |||||| | || || | | | || || | | || ||
Sbjct 94158 G--TCTTGGATGACCTTCTTCGATGGGCGGTTGTTA-AGGTGAGAGAAGAGGAGGCAGGC 94214
Query 24140 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 24199
||||| ||| |||||||| || | | || |||||||| || || || || || ||
Sbjct 94215 AAAATCAGTGTGCAGACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTAAGACCCGG 94274
Query 24200 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 24259
||| | || ||||| || | ||| || ||||| ||||| || || || ||||| || ||
Sbjct 94275 CATCATACCGCGCTTCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAGATACC 94334
Query 24260 TTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG-CT--GTCATGTATCCA 24316
|| || || ||||| |||| || | || | ||| | || ||| || |||||
Sbjct 94335 CTCAACCGCAGCAAAAGCAACGAGACGTTGAGCGAAACAAGATTCTTGGTCTTGAATCCA 94394
Query 24317 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376
| ||||||||||||||||| | ||| || || || || || |||| || |
Sbjct 94395 GTGAATGGCCCAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCATCGAACAA 94454
Query 24377 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 24436
|| || | | || || |||| ||||| || || | |||| || | || ||
Sbjct 94455 GTATGTTCTCTGCTTTGGCTCCTTAATGTATGTGTCGATGAGAAGAGAGTATGTCTCTGA 94514
Query 24437 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 24496
|| ||||| || || || || || |||||||| |||| || || | | ||| ||
Sbjct 94515 GTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCTGGGACCTGAAC 94574
Query 24497 TTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 24556
||| | | || ||||| | || || |||||||| || || || || ||||| ||
Sbjct 94575 TTCACCAGAGAAACGTTCGACCAAGTTCTCATTCACAATACCATCTGAAGCGGCAAAGAA 94634
Query 24557 CGCCAATACATGTTTTATAAAATA---TTTTTCGTC-TGGTGTTAGTTTATTCCAATCAT 24612
|| | ||||| || || || | ||||| | | | | || ||||| || |
Sbjct 94635 GGCAAGAACATGGGAGATGAAGTAGCGCTCATCGTCATTGAG-GCGATTGTTCCAGTCGT 94693
Query 24613 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 24672
| ||| || || | ||| | ||||| | ||||| ||||| || || ||||| || |
Sbjct 94694 GAAGATCCTTTGACAGATCGATCTCTTCGGCAGTCCAGAATGAGGCTTCAGCCTTCTTGT 94753
Query 24673 ACATATTCCAGAT 24685
|||| | ||||||
Sbjct 94754 ACATTTGCCAGAT 94766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593716390092960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |