Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq689 197 1e-45 seq96 111 2e-19 seq667 93.3 4e-14 seq623 93.3 4e-14 >seq689 Length=208963 Score = 197 bits (218), Expect = 1e-45 Identities = 383/561 (68%), Gaps = 11/561 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| || || || |||||||| | ||| ||| | || ||| Sbjct 94766 ATCTGGCAAATGTACAAGAAGGCTGAAGCCTCATTCTGGACTGCCGAAGAGATCGATCTG 94707 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || ||||| ||||||| | ||| | || ||| | |||||| | |||||| Sbjct 94706 TCAAAGGATCTTCACGACTGGAACAATCGCCTCAATGACGATGAGCGCTACTTCATCTCC 94647 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || ||||| || ||||| || || || || || ||||| ||||||| ||| Sbjct 94646 CATGTTCTTGCCTTCTTTGCCGCTTCAGATGGTATTGTGAATGAGAACTTGGTCGAACGT 94587 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| || || || ||||| | || || || |||||||||||||| |||||| ||| Sbjct 94586 TTCTCTGGTGAAGTTCAGGTCCCAGAAGCACGATGCTTCTACGGCTTCCAGATCATGATG 94527 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTTC 116928 |||||| | ||||| || | || || ||||||||||| ||| | | || | Sbjct 94526 GAGAACATCCACTCAGAGACATACTCTCTTCTCATCGACACATACATTAAGGAGC-CAAA 94468 Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | | ||||| | | ||||| | ||||| || || || || || || ||||||| Sbjct 94467 GCA-GAGAACATAC--TTGTTCGATGCCATTGATACCATCCCATGTATCCGCAAGAAGGC 94411 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 ||| ||||| | | |||||| | | ||| | |||| | || || || || Sbjct 94410 CGATTGGGCCATTCACTGGATTCAAGACCAAGAATCTTGTTTCGCTCAACGTCTCGTTGC 94351 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 || || || || ||||| ||||||| ||||| ||| || |||| || ||| | || Sbjct 94350 TTTTGCTGCGGTTGAGGGTATCTTCTTCTCGGGTTCTTTTGCATCCATCTTCTGGTTGAA 94291 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| ||||| | ||||| || || || ||| ||||| | ||||| | || ||||| Sbjct 94290 GAAGCGCGGTATGATGCCGGGTCTTACATTCTCTAACGAATTGATCTCTCGTGATGAGGG 94231 Query 117169 TCTGCATTGCGACTTTGCCTG 117189 |||||| || |||||||| Sbjct 94230 TCTGCACACTGATTTTGCCTG 94210 >seq96 Length=163266 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || |||||||| || || |||||| | || || ||| | || Sbjct 52640 ATGCAAATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTTGAGGTGGAATCGTCC 52699 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | ||||| || || | || || ||||||||||| | ||||| Sbjct 52700 GATACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCACCTGACCAA 52759 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || |||| ||| ||||| || || || |||| || || | ||| |||||| Sbjct 52760 CAACGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGTACTTTGTCCGATTACAAC 52819 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| |||| || || || || Sbjct 52820 ATCCAGAAGGAATCCACCCTTCACCTTGT 52848 >seq667 Length=237617 Score = 93.3 bits (102), Expect = 4e-14 Identities = 142/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || || || ||||| ||||||||| | || ||||| | | || | | | Sbjct 144038 TCGTCAAGACTCTTACTGGCAAGACCATCACCCTTGAGGTCGAGTCTTCAGATACCATCG 143979 Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | |||| ||||| ||| || | ||||| ||||| ||||| | || || ||||| ||| Sbjct 143978 ACAACG-TCAAGTCAAAGATCCAGGACAAGGAGGGTATCCCACCCGATCAACAACGTCTC 143920 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 || | ||| ||||| || |||| || | || || ||| || ||||||||||||||| Sbjct 143919 ATTTTCGCTGGCAAGCAATTGGAGGATGGCCGTACTCTCTCAGATTACAACATCCAGAAG 143860 Query 40879 GAGGCCACGCTGCATCTAGT 40898 || | || || || || || Sbjct 143859 GAATCTACCCTTCACCTTGT 143840 >seq623 Length=266034 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || |||||||| ||||||||||| | || || ||| | |||| | | | Sbjct 249527 TTCGTCAAGACCCTCACGGGTAAAACCATCACTCTTGAGGTGGAATCATCCGATACCATC 249586 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || |||| ||||| || || || || | ||||| ||||| || Sbjct 249587 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCACCCGACCAACAACGTCTG 249646 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 || | ||| ||||| || || || || | ||||| | | ||||||||||||||| ||| Sbjct 249647 ATTTTCGCCGGCAAGCAACTTGAGGATGGCCGCACTTTGAGCGACTACAACATCCAAAAG 249706 Query 40879 G 40879 | Sbjct 249707 G 249707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515214678951520