Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq689 197 1e-45
seq96 111 2e-19
seq667 93.3 4e-14
seq623 93.3 4e-14
>seq689
Length=208963
Score = 197 bits (218), Expect = 1e-45
Identities = 383/561 (68%), Gaps = 11/561 (2%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||| || || || |||||||| | ||| ||| | || |||
Sbjct 94766 ATCTGGCAAATGTACAAGAAGGCTGAAGCCTCATTCTGGACTGCCGAAGAGATCGATCTG 94707
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|| ||||| ||||||| | ||| | || ||| | |||||| | ||||||
Sbjct 94706 TCAAAGGATCTTCACGACTGGAACAATCGCCTCAATGACGATGAGCGCTACTTCATCTCC 94647
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|| || || ||||| || ||||| || || || || || ||||| ||||||| |||
Sbjct 94646 CATGTTCTTGCCTTCTTTGCCGCTTCAGATGGTATTGTGAATGAGAACTTGGTCGAACGT 94587
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| || || || ||||| | || || || |||||||||||||| |||||| |||
Sbjct 94586 TTCTCTGGTGAAGTTCAGGTCCCAGAAGCACGATGCTTCTACGGCTTCCAGATCATGATG 94527
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTTC 116928
|||||| | ||||| || | || || ||||||||||| ||| | | || |
Sbjct 94526 GAGAACATCCACTCAGAGACATACTCTCTTCTCATCGACACATACATTAAGGAGC-CAAA 94468
Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988
| | ||||| | | ||||| | ||||| || || || || || || |||||||
Sbjct 94467 GCA-GAGAACATAC--TTGTTCGATGCCATTGATACCATCCCATGTATCCGCAAGAAGGC 94411
Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048
||| ||||| | | |||||| | | ||| | |||| | || || || ||
Sbjct 94410 CGATTGGGCCATTCACTGGATTCAAGACCAAGAATCTTGTTTCGCTCAACGTCTCGTTGC 94351
Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108
|| || || || ||||| ||||||| ||||| ||| || |||| || ||| | ||
Sbjct 94350 TTTTGCTGCGGTTGAGGGTATCTTCTTCTCGGGTTCTTTTGCATCCATCTTCTGGTTGAA 94291
Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168
||| ||||| | ||||| || || || ||| ||||| | ||||| | || |||||
Sbjct 94290 GAAGCGCGGTATGATGCCGGGTCTTACATTCTCTAACGAATTGATCTCTCGTGATGAGGG 94231
Query 117169 TCTGCATTGCGACTTTGCCTG 117189
|||||| || ||||||||
Sbjct 94230 TCTGCACACTGATTTTGCCTG 94210
>seq96
Length=163266
Score = 111 bits (122), Expect = 2e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || |||||||| || || |||||| | || || ||| | ||
Sbjct 52640 ATGCAAATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTTGAGGTGGAATCGTCC 52699
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | ||||| || || | || || ||||||||||| | |||||
Sbjct 52700 GATACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCACCTGACCAA 52759
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| || |||| ||| ||||| || || || |||| || || | ||| ||||||
Sbjct 52760 CAACGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGTACTTTGTCCGATTACAAC 52819
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||| |||| || || || ||
Sbjct 52820 ATCCAGAAGGAATCCACCCTTCACCTTGT 52848
>seq667
Length=237617
Score = 93.3 bits (102), Expect = 4e-14
Identities = 142/200 (71%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759
|||| || || || || ||||| ||||||||| | || ||||| | | || | | |
Sbjct 144038 TCGTCAAGACTCTTACTGGCAAGACCATCACCCTTGAGGTCGAGTCTTCAGATACCATCG 143979
Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| |||| ||||| ||| || | ||||| ||||| ||||| | || || ||||| |||
Sbjct 143978 ACAACG-TCAAGTCAAAGATCCAGGACAAGGAGGGTATCCCACCCGATCAACAACGTCTC 143920
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|| | ||| ||||| || |||| || | || || ||| || |||||||||||||||
Sbjct 143919 ATTTTCGCTGGCAAGCAATTGGAGGATGGCCGTACTCTCTCAGATTACAACATCCAGAAG 143860
Query 40879 GAGGCCACGCTGCATCTAGT 40898
|| | || || || || ||
Sbjct 143859 GAATCTACCCTTCACCTTGT 143840
>seq623
Length=266034
Score = 93.3 bits (102), Expect = 4e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || |||||||| ||||||||||| | || || ||| | |||| | | |
Sbjct 249527 TTCGTCAAGACCCTCACGGGTAAAACCATCACTCTTGAGGTGGAATCATCCGATACCATC 249586
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || |||| ||||| || || || || | ||||| ||||| ||
Sbjct 249587 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCACCCGACCAACAACGTCTG 249646
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|| | ||| ||||| || || || || | ||||| | | ||||||||||||||| |||
Sbjct 249647 ATTTTCGCCGGCAAGCAACTTGAGGATGGCCGCACTTTGAGCGACTACAACATCCAAAAG 249706
Query 40879 G 40879
|
Sbjct 249707 G 249707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515214678951520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |