Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq667 116 3e-21
>seq667
Length=237617
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| || |||||||||| ||| | ||||| ||| ||| || |||||||||||||| |
Sbjct 143594 CCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGAC 143653
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| || ||| || || || |||||||| |||| || || |||||||| || ||
Sbjct 143654 AAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGGA 143713
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| |||||||| ||| || || ||| || | || | ||||| | ||||||
Sbjct 143714 ATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGACT 143773
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | ||| || ||||||| || || ||||| ||||||||
Sbjct 143774 TCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || |||||||||||||||||||||| || ||| |||||||| ||||||||
Sbjct 143365 ACCACCACGTAATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGA 143424
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| ||| || ||| || | ||||| || ||| |||| || || |||||||| || ||
Sbjct 143425 CAAAGTTCGGCCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGG 143484
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| || |||||||| || || ||| || | || | ||||| | ||| ||
Sbjct 143485 AATTCCTTCCTTGTCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAAC 143544
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | |||||||| |||| ||| || ||||| || |||||
Sbjct 143545 TTCCAGTGTGATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592
Score = 114 bits (126), Expect = 1e-20
Identities = 95/115 (83%), Gaps = 1/115 (1%)
Strand=Plus/Plus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| |||||||| || ||||||||||||||||||| |||||| ||| ||||
Sbjct 144125 CAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAATCGCTCAGAGTGCGACCATCTTCGA 144184
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
| ||||| || || |||| ||||| || || |||||||| ||||||||||||||
Sbjct 144185 GTTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATGCCCTCCTTGTC 144239
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
||||| || || || ||||||||||| | ||| || |||||| | || || |||
Sbjct 143852 GTAGATTCCTTCTGGATGTTGTAATCTGAGAGAGTACGGCCATCCTCCAATTGCTTGCCA 143911
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| | |||||||| || |||||||| || || ||||||||||| || ||| ||
Sbjct 143912 GCGAAAATGAGACGTTGTTGATCGGGTGGGATACCCTCCTTGTCCTGGATCTTTGACTTG 143971
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||| || | ||||||||| | ||| | || ||||| || |||||
Sbjct 143972 ACGTTGTCGATGGTATCTGAAGACTCGACCTCAAGGGTGATGGTCTTGCCAGTAAGAGTC 144031
Query 118722 TTTAC 118726
|| ||
Sbjct 144032 TTGAC 144036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433826688309784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |