Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq667 123 3e-23 seq96 96.9 4e-15 >seq667 Length=237617 Score = 123 bits (136), Expect = 3e-23 Identities = 170/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010 || || || || | ||| | ||||||||| || | |||||||||||||||||||||||| Sbjct 143360 TACTGACCACCACGTAATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAA 143419 Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070 || | || ||| || | || || | || ||||| ||||| || || || ||||| || Sbjct 143420 TCTGACAAAGTTCGGCCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCT 143479 Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGA 43129 | || | | ||||||||| ||| || ||| | ||| | | | ||||| || Sbjct 143480 GGTGGAATTCCTTCCTTGTCCTGGATCTTGGATTTCA-CGTTGTCAATTGTGTCTGATGA 143538 Query 43130 TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || || | ||||| ||||||||||| | ||||| ||||||||||||||| Sbjct 143539 CTCAACTTCCAGTGTGATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCATT 143593 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| || | ||| | || ||| | || | |||||||||||| ||||| |||||||| | Sbjct 143593 TCCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGA 143652 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || ||| || | || || || ||||| ||||| || || || || ||||| || | || Sbjct 143653 CAAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGG 143712 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | |||||| || ||| || ||| | | | | |||||| || || || Sbjct 143713 AATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGAC 143772 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| || || || || | |||||| |||||||| ||||| Sbjct 143773 TTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820 >seq96 Length=163266 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || |||||||| | || ||| || |||| || || ||||| || ||||| Sbjct 52830 TCCTTCTGGATGTTGTAATCGGACAAAGTACGACCGTCTTCGAGTTGCTTGCCGGCGAAG 52771 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || || || ||||| | || | || |||||| ||| ||| || |||| | Sbjct 52770 ATCAGACGTTGTTGGTCAGGTGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTG 52711 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | || ||| ||||||||| || | ||||| || || ||||| || ||||| || Sbjct 52710 TCGATGGTATCGGACGATTCCACCTCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACG 52651 Query 43173 AAGATTTGCAT 43183 ||||||||||| Sbjct 52650 AAGATTTGCAT 52640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571812582300560