Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq667 123 3e-23
seq96 96.9 4e-15
>seq667
Length=237617
Score = 123 bits (136), Expect = 3e-23
Identities = 170/235 (72%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010
|| || || || | ||| | ||||||||| || | ||||||||||||||||||||||||
Sbjct 143360 TACTGACCACCACGTAATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAA 143419
Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070
|| | || ||| || | || || | || ||||| ||||| || || || ||||| ||
Sbjct 143420 TCTGACAAAGTTCGGCCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCT 143479
Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGA 43129
| || | | ||||||||| ||| || ||| | ||| | | | ||||| ||
Sbjct 143480 GGTGGAATTCCTTCCTTGTCCTGGATCTTGGATTTCA-CGTTGTCAATTGTGTCTGATGA 143538
Query 43130 TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|| || || | ||||| ||||||||||| | ||||| |||||||||||||||
Sbjct 143539 CTCAACTTCCAGTGTGATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCATT 143593
Score = 91.5 bits (100), Expect = 2e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
||| || | ||| | || ||| | || | |||||||||||| ||||| |||||||| |
Sbjct 143593 TCCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGA 143652
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| ||| || | || || || ||||| ||||| || || || || ||||| || | ||
Sbjct 143653 CAAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGG 143712
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | |||||| || ||| || ||| | | | | |||||| || || ||
Sbjct 143713 AATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGAC 143772
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | ||||| || || || || | |||||| |||||||| |||||
Sbjct 143773 TTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820
>seq96
Length=163266
Score = 96.9 bits (106), Expect = 4e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || || |||||||| | || ||| || |||| || || ||||| || |||||
Sbjct 52830 TCCTTCTGGATGTTGTAATCGGACAAAGTACGACCGTCTTCGAGTTGCTTGCCGGCGAAG 52771
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || || || ||||| | || | || |||||| ||| ||| || |||| |
Sbjct 52770 ATCAGACGTTGTTGGTCAGGTGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTG 52711
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | || ||| ||||||||| || | ||||| || || ||||| || ||||| ||
Sbjct 52710 TCGATGGTATCGGACGATTCCACCTCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACG 52651
Query 43173 AAGATTTGCAT 43183
|||||||||||
Sbjct 52650 AAGATTTGCAT 52640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571812582300560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |