Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq667 100 2e-16
>seq667
Length=237617
Score = 100 bits (110), Expect = 2e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || ||||| | ||| ||| ||||| |||||||| || || || |||| | ||
Sbjct 143837 AGGACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCTGAGAGAGTACGGCCATCC 143896
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
||||| |||||||| ||||||||||| || || || ||| || | | |||||||||
Sbjct 143897 TCCAATTGCTTGCCAGCGAAAATGAGACGTTGTTGATCGGGTGGGATACCCTCCTTGTCC 143956
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
|||||| ||| | | | | || | ||| | || ||||| || | ||||||||
Sbjct 143957 TGGATCTTTGACTTGACGTTGTCGATGGTATCTGAAGACTCGACCTCAAGGGTGATGGTC 144016
Query 34358 TTGCCGGTGAGAGTTTTCAC 34377
||||| || ||||| || ||
Sbjct 144017 TTGCCAGTAAGAGTCTTGAC 144036
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
|||||| || | |||||||| ||||| | || || || ||||| |||||||| || ||
Sbjct 143593 TCCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGA 143652
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| ||| | || |||| ||||| || || || || || || ||||| || ||
Sbjct 143653 CAAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGG 143712
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | |||||| || ||||| || | | | |||| || | || |||||
Sbjct 143713 AATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGAC 143772
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||| || || ||||| | || |||||||||||||||||
Sbjct 143773 TTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820
Score = 82.4 bits (90), Expect = 5e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234
|||| ||||| ||| | ||| || || || || || ||||| || |||| ||| |
Sbjct 143378 CTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGACAAAGTTCGGCCA 143437
Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294
|| ||||| || || |||||||| || || || ||||| || || | | ||||||
Sbjct 143438 TCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCCTTCCTTG 143497
Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354
|| ||||| || | | | | || | || | || || || |||| |||||
Sbjct 143498 TCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAACTTCCAGTGTGATT 143557
Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| || | ||| ||||||||||| |||||
Sbjct 143558 GTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323069235917120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |