Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq689 123 2e-23
>seq689
Length=208963
Score = 123 bits (136), Expect = 2e-23
Identities = 543/851 (64%), Gaps = 9/851 (1%)
Strand=Plus/Plus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || |||| ||| | ||| |||||||| ||||| ||||| | | || || |||
Sbjct 93919 TTTTGGTAATCACCAACACGCTTCTCAAAGAAGTTTGTCTTTCCAGCAAGGGAGATGTTT 93978
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAAT 16063
||||| || || || || || | || ||| | || | | || | | | |
Sbjct 93979 TCCATGAAGTCGAATGGGTTGGTGGAGTTGTAGAACTTCTGGTTACCGAGAGCGATGAGG 94038
Query 16064 AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 16123
| ||| || || ||||| || || || || ||||| | | | |||||| || | |
Sbjct 94039 AGTCTGTCGGCAACAAACTCGATGTATTGCTTCATGAGAGTAGCGTTCATGCCGAGGAGA 94098
Query 16124 TTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATA 16183
| || | || || || || || | || ||| || | ||| || || |||| ||
Sbjct 94099 CCACATGGAAGAGCATCAGTCAAGAATTCTTGTTCGATTTCAACAGCCTCGGTGATAATG 94158
Query 16184 TCTCTTACTACACTATTTAACGGAGGGTTTAATAAGTGTTTAAACATTATACAAGCAAAA 16243
||| | || | || | || |||| | ||| || | | || ||||||
Sbjct 94159 TCTTGGATGACCTTCTTCGATGGGCGGTTGTTAAGGTGAGAGAAGAGGAGGCAGGCAAAA 94218
Query 16244 TCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATT 16303
||| |||| || || || | | || || ||||| || ||||||||||| |||||
Sbjct 94219 TCAGTGTGCAGACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTAAGACCCGGCATC 94278
Query 16304 AGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCA 16363
| || || || || | ||| || || | ||||| ||||| || ||||| ||||| |||
Sbjct 94279 ATACCGCGCTTCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAGATACCCTCA 94338
Query 16364 ACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttact-ttctatccattt 16422
|| || ||||| ||||| | || | | || | ||| || | || ||||| |
Sbjct 94339 ACCGCAGCAAAAGCAACGAGACGTTGAGCG-AAACAAGATTCTTGGTCTTGAATCCAGTG 94397
Query 16423 tttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATA 16482
| ||||||| || || | | ||| ||| | || || |||| || || ||
Sbjct 94398 AATGGCCCAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCATCGAACAAGTA 94457
Query 16483 -AtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAAT 16541
|| | | ||||| || ||| || || || || || | | || | ||||| |
Sbjct 94458 TGTTCTCTGCTTTG-GCTCCTTAATGTATGTGTCGATGAGAAGAGAGTATGTCTCTGAGT 94516
Query 16542 GAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTT 16601
| || |||||||| ||||| || || || ||||||| ||||| | | || ||||
Sbjct 94517 GGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCTGGGACCTGAACTT 94576
Query 16602 CAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACG 16661
|| | || | ||| | ||||| || || || || ||||| ||| ||||| || |
Sbjct 94577 CACCAGAGAAACGTTCGACCAAGTTCTCATTCACAATACCATCTGAAGCGGCAAAGAAGG 94636
Query 16662 CAAGTATGTGTTTAATAAAAt---ttttttCGTTATCTGA-AAGTTTTAACCAGTCAGAA 16717
|||| | || || || | | |||| || ||| | || |||||| |
Sbjct 94637 CAAGAACATGGGAGATGAAGTAGCGCTCATCGTCAT-TGAGGCGATTGTTCCAGTCGTGA 94695
Query 16718 AAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATAC 16777
| ||| ||||| | ||||| |||||| ||||||| || || || ||||||| || |||
Sbjct 94696 AGATCCTTTGACAGATCGATCTCTTCGGCAGTCCAGAATGAGGCTTCAGCCTTCTTGTAC 94755
Query 16778 ATTTTCCATAT 16788
|||| ||| ||
Sbjct 94756 ATTTGCCAGAT 94766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462507941457200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |