Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq689 123 2e-23 >seq689 Length=208963 Score = 123 bits (136), Expect = 2e-23 Identities = 543/851 (64%), Gaps = 9/851 (1%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || |||| ||| | ||| |||||||| ||||| ||||| | | || || ||| Sbjct 93919 TTTTGGTAATCACCAACACGCTTCTCAAAGAAGTTTGTCTTTCCAGCAAGGGAGATGTTT 93978 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAAT 16063 ||||| || || || || || | || ||| | || | | || | | | | Sbjct 93979 TCCATGAAGTCGAATGGGTTGGTGGAGTTGTAGAACTTCTGGTTACCGAGAGCGATGAGG 94038 Query 16064 AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 16123 | ||| || || ||||| || || || || ||||| | | | |||||| || | | Sbjct 94039 AGTCTGTCGGCAACAAACTCGATGTATTGCTTCATGAGAGTAGCGTTCATGCCGAGGAGA 94098 Query 16124 TTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATA 16183 | || | || || || || || | || ||| || | ||| || || |||| || Sbjct 94099 CCACATGGAAGAGCATCAGTCAAGAATTCTTGTTCGATTTCAACAGCCTCGGTGATAATG 94158 Query 16184 TCTCTTACTACACTATTTAACGGAGGGTTTAATAAGTGTTTAAACATTATACAAGCAAAA 16243 ||| | || | || | || |||| | ||| || | | || |||||| Sbjct 94159 TCTTGGATGACCTTCTTCGATGGGCGGTTGTTAAGGTGAGAGAAGAGGAGGCAGGCAAAA 94218 Query 16244 TCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATT 16303 ||| |||| || || || | | || || ||||| || ||||||||||| ||||| Sbjct 94219 TCAGTGTGCAGACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTAAGACCCGGCATC 94278 Query 16304 AGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCA 16363 | || || || || | ||| || || | ||||| ||||| || ||||| ||||| ||| Sbjct 94279 ATACCGCGCTTCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAGATACCCTCA 94338 Query 16364 ACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttact-ttctatccattt 16422 || || ||||| ||||| | || | | || | ||| || | || ||||| | Sbjct 94339 ACCGCAGCAAAAGCAACGAGACGTTGAGCG-AAACAAGATTCTTGGTCTTGAATCCAGTG 94397 Query 16423 tttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATA 16482 | ||||||| || || | | ||| ||| | || || |||| || || || Sbjct 94398 AATGGCCCAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCATCGAACAAGTA 94457 Query 16483 -AtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAAT 16541 || | | ||||| || ||| || || || || || | | || | ||||| | Sbjct 94458 TGTTCTCTGCTTTG-GCTCCTTAATGTATGTGTCGATGAGAAGAGAGTATGTCTCTGAGT 94516 Query 16542 GAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTT 16601 | || |||||||| ||||| || || || ||||||| ||||| | | || |||| Sbjct 94517 GGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCTGGGACCTGAACTT 94576 Query 16602 CAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACG 16661 || | || | ||| | ||||| || || || || ||||| ||| ||||| || | Sbjct 94577 CACCAGAGAAACGTTCGACCAAGTTCTCATTCACAATACCATCTGAAGCGGCAAAGAAGG 94636 Query 16662 CAAGTATGTGTTTAATAAAAt---ttttttCGTTATCTGA-AAGTTTTAACCAGTCAGAA 16717 |||| | || || || | | |||| || ||| | || |||||| | Sbjct 94637 CAAGAACATGGGAGATGAAGTAGCGCTCATCGTCAT-TGAGGCGATTGTTCCAGTCGTGA 94695 Query 16718 AAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATAC 16777 | ||| ||||| | ||||| |||||| ||||||| || || || ||||||| || ||| Sbjct 94696 AGATCCTTTGACAGATCGATCTCTTCGGCAGTCCAGAATGAGGCTTCAGCCTTCTTGTAC 94755 Query 16778 ATTTTCCATAT 16788 |||| ||| || Sbjct 94756 ATTTGCCAGAT 94766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462507941457200