Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq698 233 2e-56 seq689 165 1e-35 >seq698 Length=89367 Score = 233 bits (258), Expect = 2e-56 Identities = 1216/1921 (63%), Gaps = 75/1921 (4%) Strand=Plus/Plus Query 62034 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62093 |||| ||| | || |||||||| || || | || | | || || |||||||||||| Sbjct 1245 TCCTGGTCGACAGTAAATTGAATTGGTGCAGCAGCAGCCATGGTGCGGAGATAGTACATT 1304 Query 62094 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 62153 || || || |||||||| |||||||| || ||||| || | |||| | Sbjct 1305 CCAGTCTTGAGACCGAGCTTCCATCCGGCGAAGTGCATGGAAGTGATTTTGCCCATGGTT 1364 Query 62154 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62213 || || || || || |||| |||||| |||||| ||||| || || | ||| ||| Sbjct 1365 GGCTCCTTCATGTGAATGTTCAATGATTGAGATTGATCAATGAAAGCACCGCGGTCAGCA 1424 Query 62214 GCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62273 ||||||| | || ||| |||||||| | || || || | ||| ||| Sbjct 1425 GCCATTTGAACAATTTGACGTTGGCTTATTTCCCAGACGGTCTTGTATAGAGCCTTGATA 1484 Query 62274 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTG 62330 || |||| || | ||| ||||| || |||||| | | ||| || ||||| Sbjct 1485 TCAGTAGGAATATTAGGAATATCTTGAATCGAACCACCAGAAGCGACAATTCTGTTCTTC 1544 Query 62331 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAAC--TC--TAAGGAGATGCGGGTTAAC 62386 || | ||| ||||| | |||| | | || | || | | ||||| || Sbjct 1545 ATGTTATCTGACCATAGAC----CAAGGTTGACAAGATCCTTGAGCAAGTATGGGTTGAC 1600 Query 62387 TACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62446 |||||||| ||||||| ||| || | |||| |||||| || || || || || | Sbjct 1601 GACTTGGAACTCTCCAGCCAAGACGCGACGAGAGTAAATGTTTGATGTGTATGGCTCAAA 1660 Query 62447 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62506 ||||||| || || | ||| || | ||||| ||||| ||||| || || ||||| | Sbjct 1661 GCACTCATTGTTACCAAGAATCTGCGAGGTTGAAGCAGTAGGCATTGGAGCAACCAAAAG 1720 Query 62507 ACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATC 62566 | || | || ||| | | ||| | | | || || ||||| | ||||||||| Sbjct 1721 AGAGTTGCGAATACCATGCTTGGCGATATCAGCCTTGAGGCTCTCCCAGTCCCAAAGATC 1780 Query 62567 CGACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTT----ACTGGCGTACGATC 62622 | || ||| |||||| || || || | ||||| | || Sbjct 1781 AGTTGGCTTGACATTCCACATGTCATATTGAAGGATGCCTTGGGAAACTGGTGAAC---- 1836 Query 62623 CTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCAC 62682 | | ||||| || || | ||| | || | ||| || | || | ||| ||| Sbjct 1837 CCGCGTATGTCTCGTAGGTTCCCTGCTCTTGAGCAAGCTGGCAGGACATAGTTAAAGCAG 1896 Query 62683 CGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATG 62742 | | ||| ||||| |||||||||| | || | | | || || || ||||| | Sbjct 1897 CATGATAGATGGTCTCAAAGATCTGAGTGTTCAATTGACGAGCCTCGGGAGAGTCAAAAG 1956 Query 62743 GA-----TAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGG 62797 || |||||| || |||| || || || | || || ||||||| ||| | || Sbjct 1957 GAAGACGTAATTTGAG-GAAT----GCATCTGCGAGACCCTGGACACCAAGACCAACTGG 2011 Query 62798 TCTATGTCTCTTATTAGAGATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAA 62856 | ||| | | |||| | || | |||||||| | || ||||| || | ||| || | Sbjct 2012 ACGATGACGCATATT-GCTCTTGCGTGCTTCTGGCACTGGGTAATAGTTGACATCGATGA 2070 Query 62857 TTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAA 62913 || || | ||| | |||| | | | ||| || | |||| |||||| Sbjct 2071 CCTTGTTCAAATTGCGAGTGACCA---CCTGGACGACCCGGTGGAGTTCCCCAAAATCGT 2127 Query 62914 A-TCGCC-CATCTATTACAAACAT--GTTCAATGCAACAG--ATGCCAGATTACACACGG 62967 | ||||| | ||| | | |||| | | | | | || | || ||||| || || | Sbjct 2128 ACTCGCCACTTCTTTCATCAACAAAGGCTGGAAGAGAGAGGGAAGCGAGATTGCAAACAG 2187 Query 62968 CTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAG 63027 | || |||| | | | | || | || || || || || | ||| | |||||||| Sbjct 2188 CGACTTCATCTGGAGCAGTGTACTCAATAATTTCGGTACACAAGTTAGAGCTCTTGATAG 2247 Query 63028 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAG 63087 | || || || | |||||| |||||| ||| || |||||||| || || ||||||||| Sbjct 2248 TACCCAAGTTCTTTTGATTGCTCTTTCGGTTGCAGGCATCCTTGTAGAGCATGAATGGAT 2307 Query 63088 TACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAG 63147 | ||||| || |||| | || | || || | ||| | | |||| || || | Sbjct 2308 TTCCAGTCTCGGTCTGTGCCTCGAGGATAGCGTACCAAAGCTTTTGAGCTTTCAT----G 2363 Query 63148 ATTTGTAT----CTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCC 63203 || || | || ||| ||||||| | ||| | || || || ||||| Sbjct 2364 GTTCGTCGACCACGCCCCTCTTGTTCGTATTTGGCATAAAGGACCTCAAATTCATCTCCA 2423 Query 63204 CAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 63263 | || | | | | | ||| |||| || || | ||| | ||||||| | || | Sbjct 2424 TAGACGTCGGCTAGACCTGGAGCCTCATGAGGGCAGAACAAAGTCCACTCT---TGATTC 2480 Query 63264 TTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGT 63319 || |||||||||||||| |||||||||||||||||||| ||| || || || | | Sbjct 2481 TTTTCAACTCGTTTCATAAAAAGATCAGGAATCCAAAGAGC-ATAGAAAAGGTCACGAGC 2539 Query 63320 TCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 63379 || ||| || || || ||||| || || ||||| | | || || || || Sbjct 2540 TCGTACTTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAATTCGAAAACGTCCGAGTG 2599 Query 63380 CCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTA 63439 ||| || || | ||| ||||| | | | || || |||||||| || ||||| || | ||| Sbjct 2600 CCATGGCTCAAGGTAAATGGCAAAAGCACCTGGTCGTTTGTTGCCACCCTGGTCAACGTA 2659 Query 63440 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGT 63499 |||||| ||||| || | || | | ||| |||| ||||||||| || |||||| || Sbjct 2660 TCTAGCAGTGTTGTTGAACACGCGGAGCATGGGAACAATACCGTTGGAAGAACCATTAGT 2719 Query 63500 ACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGC 63559 ||| || || ||| |||| ||||| | ||| ||||| || || || || Sbjct 2720 CCCGCCAATGTAAGAGCCAGTGGCTCGAATTCTGTGAATGTTGAGACCGATACCACCGGC 2779 Query 63560 CATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATC 63619 | || ||||| | || || || || || |||||||| ||||| || || || || Sbjct 2780 GGTCTTGGAGATCATGGCACAAGTCTTCAAAGTATCATAGATTCCTTCGATACTGTCCTC 2839 Query 63620 GATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAA 63679 |||||| | | || || ||||| || | ||| ||| || ||||| || | Sbjct 2840 TTTCATGTCGATCAAGAAGCATGAGGACATCTGAGGCTGAGGAGTACCAGCATTGAAAAG 2899 Query 63680 GGTAGGAGAAGCGTGCGTAAACCATTTTTCA--GAAAGTAGATTGTACGTCT-CAATA-- 63734 ||| || |||||||| || || | |||| || | || ||||| || | ||| | Sbjct 2900 GGTTGGGGAAGCGTGGGTGAA--TGTCTTCAACGACAAAAGCTTGTAGGTTTCCAAGACA 2957 Query 63735 -GCTGA--GTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGA 63791 | | | ||| | |||| || || || || |||||||| | |||||| || Sbjct 2958 CGTTCAATGTCATCACCCCA------GATACCAACAGCAACACGCATCAGCATGTGTTGT 3011 Query 63792 GGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 63851 |||| ||| | ||||| || || | | ||| ||| |||||| || || ||| Sbjct 3012 GGTCGCTCAGCTGGCTTGTTACCAATCTTGAGTAGGTATGATCTTTCCATTGTCTTGAAA 3071 Query 63852 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTA 63911 |||||||| | || |||||||| ||||| | ||| |||| |||| | ||||| | Sbjct 3072 CCAAAATATTGATAGTTAAAGTCTCTGTCGTAGACGATAGCCGAGTTGAATTCATCCTCA 3131 Query 63912 T 63912 | Sbjct 3132 T 3132 >seq689 Length=208963 Score = 165 bits (182), Expect = 1e-35 Identities = 554/853 (65%), Gaps = 16/853 (2%) Strand=Plus/Plus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| ||||| ||||| || || || || || || ||||| | | || || ||| Sbjct 93919 TTTTGGTAATCACCAACACGCTTCTCAAAGAAGTTTGTCTTTCCAGCAAGGGAGATGTTT 93978 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTA-AAttttt--ttAAATCCCAATTCAGAA 33407 |||||||| || || || ||||| ||||| || || | ||| || | | Sbjct 93979 TCCATGAAGTCGAATGGGTTGGTGGAGTTGTAGAACTTCTGGTTA---CCGAGAGCGATG 94035 Query 33408 ATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATG 33467 | | ||| || || || || || || ||| ||||| | | ||||| || | | Sbjct 94036 AGGAGTCTGTCGGCAACAAACTCGATGTATTGCTTCATGAGAGTAGCGTTCATGCCGAGG 94095 Query 33468 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATA 33527 || | ||||||||| |||| | ||||||||||| || || || | || ||| Sbjct 94096 AGACCACATGGAAGAGCATCAGTCAAGAATTCTTGTTCGATTTCAACAGCCTCGGTGATA 94155 Query 33528 ATAAATCTAACGGT-TTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGC 33586 || | | | |||||| | || || ||| | | || || | | || || Sbjct 94156 ATGTCTTGGATGACCTTCTTCGATGGGCGGTTGTTA-AGGTGAGAGAAGAGGAGGCAGGC 94214 Query 33587 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGG 33646 ||||| |||||||||||| || | | || ||||||||||| || || || || || Sbjct 94215 AAAATCAGTGTGCAGACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTAAGACCCGG 94274 Query 33647 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCC 33706 ||| | || ||||| || | ||| || ||||| || || || || || |||||||| || Sbjct 94275 CATCATACCGCGCTTCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAGATACC 94334 Query 33707 TTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCA 33763 || || |||||||| |||| || | | | ||| | | ||| || ||||| Sbjct 94335 CTCAACCGCAGCAAAAGCAACGAGACGTTGAGCGAAACAAGATTCTTGGTCTTGAATCCA 94394 Query 33764 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33823 | ||||||||||||||||| | ||| || || || || ||||||| || | Sbjct 94395 GTGAATGGCCCAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCATCGAACAA 94454 Query 33824 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 33883 || || | | || || |||| || || ||||| | |||| || | || || Sbjct 94455 GTATGTTCTCTGCTTTGGCTCCTTAATGTATGTGTCGATGAGAAGAGAGTATGTCTCTGA 94514 Query 33884 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCAC 33943 || ||||| || || ||||| || |||||||| |||| || || | | ||| || Sbjct 94515 GTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCTGGGACCTGAAC 94574 Query 33944 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAA 34003 ||| | | || ||||| | || || |||||||| || ||||| || ||||| || Sbjct 94575 TTCACCAGAGAAACGTTCGACCAAGTTCTCATTCACAATACCATCTGAAGCGGCAAAGAA 94634 Query 34004 CGCCAATACATGTTTTATAAAATA---TTTTTCGTC-TGGTGTTAGTTTATTCCAATCAT 34059 || | ||||| || || || | ||||| | | | | || ||||| || | Sbjct 94635 GGCAAGAACATGGGAGATGAAGTAGCGCTCATCGTCATTGAG-GCGATTGTTCCAGTCGT 94693 Query 34060 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 34119 | ||| || || | ||| | ||||| | ||||| ||||| || || ||||| || | Sbjct 94694 GAAGATCCTTTGACAGATCGATCTCTTCGGCAGTCCAGAATGAGGCTTCAGCCTTCTTGT 94753 Query 34120 ACATATTCCAGAT 34132 |||| | |||||| Sbjct 94754 ACATTTGCCAGAT 94766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629812073350560