Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq698 223 5e-53 >seq698 Length=89367 Score = 223 bits (246), Expect = 5e-53 Identities = 1214/1921 (63%), Gaps = 75/1921 (4%) Strand=Plus/Plus Query 64827 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 64886 |||| ||| | || |||||||| || || | || | | || || |||||||||||| Sbjct 1245 TCCTGGTCGACAGTAAATTGAATTGGTGCAGCAGCAGCCATGGTGCGGAGATAGTACATT 1304 Query 64887 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 64946 || || || |||||||| |||||||| || ||||| || | |||| | Sbjct 1305 CCAGTCTTGAGACCGAGCTTCCATCCGGCGAAGTGCATGGAAGTGATTTTGCCCATGGTT 1364 Query 64947 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 65006 || || || || || |||| |||||| |||||| ||||| || || | ||| ||| Sbjct 1365 GGCTCCTTCATGTGAATGTTCAATGATTGAGATTGATCAATGAAAGCACCGCGGTCAGCA 1424 Query 65007 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 65066 ||||||| | || ||| |||||||| | || || || | ||| ||| Sbjct 1425 GCCATTTGAACAATTTGACGTTGGCTTATTTCCCAGACGGTCTTGTATAGAGCCTTGATA 1484 Query 65067 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 65123 || |||| || | ||| ||||| || |||||| || | ||| || ||||| Sbjct 1485 TCAGTAGGAATATTAGGAATATCTTGAATCGAACCACCAGAAGCGACAATTCTGTTCTTC 1544 Query 65124 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAAC--TC--TAAGGAGATGCGGATTAAC 65179 || | ||| ||||| | |||| | | || | || | | || || || Sbjct 1545 ATGTTATCTGACCATAGAC----CAAGGTTGACAAGATCCTTGAGCAAGTATGGGTTGAC 1600 Query 65180 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 65239 ||||| || ||||||| ||| || | |||| |||||| || || || || || | Sbjct 1601 GACTTGGAACTCTCCAGCCAAGACGCGACGAGAGTAAATGTTTGATGTGTATGGCTCAAA 1660 Query 65240 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 65299 ||||||| || || | ||| || | ||||| ||||| ||||| || || ||||| | Sbjct 1661 GCACTCATTGTTACCAAGAATCTGCGAGGTTGAAGCAGTAGGCATTGGAGCAACCAAAAG 1720 Query 65300 ACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 65359 | || | || ||| | | ||| | | | || || ||||| | ||||||||| Sbjct 1721 AGAGTTGCGAATACCATGCTTGGCGATATCAGCCTTGAGGCTCTCCCAGTCCCAAAGATC 1780 Query 65360 CGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATC 65415 | || || ||| || || || | ||||| | || Sbjct 1781 AGTTGGCTTGACATTCCACATGTCATATTGAAGGATGCCTTGGGAAACTGGTGAAC---- 1836 Query 65416 CTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCAC 65475 | | ||||| ||||| | ||| | || | ||| || | || | ||| ||| Sbjct 1837 CCGCGTATGTCTCGTAGGTTCCCTGCTCTTGAGCAAGCTGGCAGGACATAGTTAAAGCAG 1896 Query 65476 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 65535 | | ||| ||||| || ||||||| | || | | | || || | ||||| | Sbjct 1897 CATGATAGATGGTCTCAAAGATCTGAGTGTTCAATTGACGAGCCTCGGGAGAGTCAAAAG 1956 Query 65536 GA-----TAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 65590 || |||||| || |||| || ||||| | || || ||||||| ||| | || Sbjct 1957 GAAGACGTAATTTGAG-GAAT----GCATCTGCGAGACCCTGGACACCAAGACCAACTGG 2011 Query 65591 TCTATGTCTCTTATTAGAGATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAA 65649 | ||| | | |||| | || | |||||||| | || ||||| || | ||| || | Sbjct 2012 ACGATGACGCATATT-GCTCTTGCGTGCTTCTGGCACTGGGTAATAGTTGACATCGATGA 2070 Query 65650 TTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAA 65706 || || | ||| | |||| | | | ||| || | |||| |||||| Sbjct 2071 CCTTGTTCAAATTGCGAGTGACCA---CCTGGACGACCCGGTGGAGTTCCCCAAAATCGT 2127 Query 65707 A-TCGCT-CATCTATTACAAACAT--GTTCAATGCAACAG--ATGCCAGATTACAAACGG 65760 | |||| | ||| | | |||| | | | | | || | || ||||| ||||| | Sbjct 2128 ACTCGCCACTTCTTTCATCAACAAAGGCTGGAAGAGAGAGGGAAGCGAGATTGCAAACAG 2187 Query 65761 CTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGG 65820 | || |||| | | | | || | || || || || || | ||| | |||||| | Sbjct 2188 CGACTTCATCTGGAGCAGTGTACTCAATAATTTCGGTACACAAGTTAGAGCTCTTGATAG 2247 Query 65821 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAG 65880 | || || || | |||||| |||||| ||| || |||||||| || || ||||||||| Sbjct 2248 TACCCAAGTTCTTTTGATTGCTCTTTCGGTTGCAGGCATCCTTGTAGAGCATGAATGGAT 2307 Query 65881 TACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAG 65940 | ||||| || |||| | || | || || | ||| | | |||| || || | Sbjct 2308 TTCCAGTCTCGGTCTGTGCCTCGAGGATAGCGTACCAAAGCTTTTGAGCTTTCAT----G 2363 Query 65941 ATTTGT--ATCTCTTTTCTCTT--TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCC 65996 || || | | | ||||| |||||| | ||| | || || || ||||| Sbjct 2364 GTTCGTCGACCACGCCCCTCTTGTTCGTATTTGGCATAAAGGACCTCAAATTCATCTCCA 2423 Query 65997 CAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 66056 | || | | | | || ||| |||| || || | ||| | ||||||| | || | Sbjct 2424 TAGACGTCGGCTAGACCTGGAGCCTCATGAGGGCAGAACAAAGTCCACTCT---TGATTC 2480 Query 66057 TTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAA-TCTCTGGT 66112 || |||||||||||||| |||||||||||||||||||| ||| | || || | | Sbjct 2481 TTTTCAACTCGTTTCATAAAAAGATCAGGAATCCAAAGAGC-ATAGAAAAGGTCACGAGC 2539 Query 66113 TCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATG 66172 || ||| || || || ||||| || || ||||| | | || || | || Sbjct 2540 TCGTACTTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAATTCGAAAACGTCCGAGTG 2599 Query 66173 CCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTA 66232 ||| || || | ||| ||||| | | | || || |||||||| || ||||| || | ||| Sbjct 2600 CCATGGCTCAAGGTAAATGGCAAAAGCACCTGGTCGTTTGTTGCCACCCTGGTCAACGTA 2659 Query 66233 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGT 66292 |||||| ||||| || | || | | ||| |||| |||||| ||||| | |||||| || Sbjct 2660 TCTAGCAGTGTTGTTGAACACGCGGAGCATGGGAACAATACCGTTGGAAGAACCATTAGT 2719 Query 66293 CCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGC 66352 |||| || || ||| | || ||||| | ||| ||||| || || || || Sbjct 2720 CCCGCCAATGTAAGAGCCAGTGGCTCGAATTCTGTGAATGTTGAGACCGATACCACCGGC 2779 Query 66353 CATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATC 66412 | || ||||| | || || || || ||||||||||| || || ||||| || || Sbjct 2780 GGTCTTGGAGATCATGGCACAAGTCTTCAAAGTATCATAGATTCCTTCGATACTGTCCTC 2839 Query 66413 CATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAA 66472 |||||| | | || || ||||| || | || ||| || ||||| || | Sbjct 2840 TTTCATGTCGATCAAGAAGCATGAGGACATCTGAGGCTGAGGAGTACCAGCATTGAAAAG 2899 Query 66473 GGTAGGAGAAGCGTGCGTAAACCATTTTTCA--GAAAGTAGATTGTACGTCT-CAATA-- 66527 ||| || |||||||| || || | |||| || | || ||||| || | ||| | Sbjct 2900 GGTTGGGGAAGCGTGGGTGAA--TGTCTTCAACGACAAAAGCTTGTAGGTTTCCAAGACA 2957 Query 66528 -GCTGA--GTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGA 66584 | | | ||| | |||| || || || || |||||||| | |||||| || Sbjct 2958 CGTTCAATGTCATCACCCCA------GATACCAACAGCAACACGCATCAGCATGTGTTGT 3011 Query 66585 GGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 66644 |||| ||| | |||||| || || | | ||| ||| |||||| || || ||| Sbjct 3012 GGTCGCTCAGCTGGCTTGTTACCAATCTTGAGTAGGTATGATCTTTCCATTGTCTTGAAA 3071 Query 66645 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTA 66704 |||||||| | || |||||||| ||||| | ||| ||||||||| || ||||| | Sbjct 3072 CCAAAATATTGATAGTTAAAGTCTCTGTCGTAGACGATAGCCGAGTTGAATTCATCCTCA 3131 Query 66705 T 66705 | Sbjct 3132 T 3132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658167024533680