Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq667 102 8e-17 seq96 89.7 5e-13 >seq667 Length=237617 Score = 102 bits (112), Expect = 8e-17 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 |||||||| || |||||||| |||||||||| |||| |||||||| ||||| || Sbjct 144136 GTAGACTCCTTCTGAATGTTGTAATCGCTCAGAGTGCGACCATCTTCGAGTTGTTTGCCG 144195 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671 ||| ||||||||||||| || |||||||| ||||| || ||||| Sbjct 144196 GCAAAGATCAGACGTTGTTGGTCGGGAGGAATGCCCTCCTTGTC 144239 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 || || || ||||| | ||| || ||||| | || ||| |||||||| || ||||| Sbjct 143363 TGACCACCACGTAATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCT 143422 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || || | ||||| | |||||||| || ||||||| ||||||||||| || Sbjct 143423 GACAAAGTTCGGCCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGT 143482 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || || ||||| ||||| ||| || ||| | | || | |||||| | | ||| Sbjct 143483 GGAATTCCTTCCTTGTCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCA 143542 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || | || | || ||||| ||||| || || || || |||||||| Sbjct 143543 ACTTCCAGTGTGATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| ||||| | || || | ||| | || ||| || |||||||| ||||| | Sbjct 143594 CCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGAC 143653 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| || || || |||||| ||||||| ||||||||||| || || Sbjct 143654 AAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGGA 143713 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || || || ||| || ||| | | || | ||||| | | ||| || Sbjct 143714 ATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGACT 143773 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | |||||| ||||||||||| || || || || |||||| Sbjct 143774 TCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCATA 143821 >seq96 Length=163266 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||| | || | ||||| || || || || || ||||| |||||| | Sbjct 52866 CCACCTCGAAGACGGAGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGAC 52807 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||||||| || || || || ||||||||||||| || || || || Sbjct 52806 AAAGTACGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGTGGG 52747 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || || || ||| || || | | || | || |||| | |||||| Sbjct 52746 ATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCGATGGTATCGGACGATTCCACC 52687 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| ||| | |||||| || || | || || ||||| |||||||| Sbjct 52686 TCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCAT 52640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496059647038400