Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq667 102 8e-17
seq96 89.7 5e-13
>seq667
Length=237617
Score = 102 bits (112), Expect = 8e-17
Identities = 85/104 (82%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|||||||| || |||||||| |||||||||| |||| |||||||| ||||| ||
Sbjct 144136 GTAGACTCCTTCTGAATGTTGTAATCGCTCAGAGTGCGACCATCTTCGAGTTGTTTGCCG 144195
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671
||| ||||||||||||| || |||||||| ||||| || |||||
Sbjct 144196 GCAAAGATCAGACGTTGTTGGTCGGGAGGAATGCCCTCCTTGTC 144239
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|| || || ||||| | ||| || ||||| | || ||| |||||||| || |||||
Sbjct 143363 TGACCACCACGTAATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCT 143422
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
|| || | ||||| | |||||||| || ||||||| ||||||||||| ||
Sbjct 143423 GACAAAGTTCGGCCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGT 143482
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714
|| || ||||| ||||| ||| || ||| | | || | |||||| | | |||
Sbjct 143483 GGAATTCCTTCCTTGTCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCA 143542
Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| || | || | || ||||| ||||| || || || || ||||||||
Sbjct 143543 ACTTCCAGTGTGATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
||||| ||||| | || || | ||| | || ||| || |||||||| ||||| |
Sbjct 143594 CCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGAC 143653
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | ||||| || || || |||||| ||||||| ||||||||||| || ||
Sbjct 143654 AAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGGA 143713
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || || || || ||| || ||| | | || | ||||| | | ||| ||
Sbjct 143714 ATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGACT 143773
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | |||||| ||||||||||| || || || || ||||||
Sbjct 143774 TCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCATA 143821
>seq96
Length=163266
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||| | || | ||||| || || || || || ||||| |||||| |
Sbjct 52866 CCACCTCGAAGACGGAGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGAC 52807
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | ||||||||| || || || || ||||||||||||| || || || ||
Sbjct 52806 AAAGTACGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGTGGG 52747
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| || || || ||| || || | | || | || |||| | ||||||
Sbjct 52746 ATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCGATGGTATCGGACGATTCCACC 52687
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||| ||| | |||||| || || | || || ||||| ||||||||
Sbjct 52686 TCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCAT 52640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496059647038400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |