Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq689 163 3e-35
>seq689
Length=208963
Score = 163 bits (180), Expect = 3e-35
Identities = 568/865 (66%), Gaps = 25/865 (3%)
Strand=Plus/Plus
Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428
||||| || |||| ||| | || ||||| ||||| || || || | || || || |||
Sbjct 93919 TTTTGGTAATCACCAACACGCTTCTCAAAGAAGTTTGTCTTTCCAGCAAGGGAGATGTTT 93978
Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAAT 13488
||||| || |||||||| || || || | | | || | ||| || | | |
Sbjct 93979 TCCATGAAGTCGAATGGGTTGGTGGAGTTGTAGAACTTCTGGTTACCGAGAGCGATGAGG 94038
Query 13489 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13548
| ||| || |||| |||||| || ||||| ||| | | | ||||| || | ||
Sbjct 94039 AGTCTGTCGGCAACAAACTCGATGTATTGCTTCATGAGAGTAGCGTTCATGCCGAGGAGA 94098
Query 13549 TTTACA-GGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 13607
||| |||| || ||| || ||||||| ||| || ||||||||| | |||||
Sbjct 94099 CC-ACATGGAAGAGCATCAGTCAAGAATTCTTGTTCGATTTCAACAGCCTCGGTGATAAT 94157
Query 13608 AATCTTA-ATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 13666
|||| || | | || || || | | || || || || | | || ||||
Sbjct 94158 G-TCTTGGATGACCTTCTTCGATGGGCGGTTGTTAAGGTGAGAGAAGAGGAGGCAGGCAA 94216
Query 13667 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13726
||||| || || |||||||| | | || | |||||| || ||||| | || ||||
Sbjct 94217 AATCAGTGTGCAGACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTAAGACCCGGCA 94276
Query 13727 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 13786
||| || || || || ||||| || || | || || || || || ||||| || ||||
Sbjct 94277 TCATACCGCGCTTCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAGATACCCT 94336
Query 13787 CAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATATCCAT 13845
|||| |||||||| || | || |||| | || | | || || || |||| |||||
Sbjct 94337 CAACCGCAGCAAAAGCAACGAGACGTTGAGCGAAACAAGATTCTTGGTCTTGA-ATCCAG 94395
Query 13846 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA- 13904
| | ||||| || | || || ||| | || || || || |||| ||| ||
Sbjct 94396 TGAATGGCCCAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCATCGAACAAG 94455
Query 13905 -ATGTTCCTTCT-CTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTA-TACATTT 13960
|||||| ||| |||| | | ||| ||||||||| || || || ||| | || | |
Sbjct 94456 TATGTTC--TCTGCTTTGGCTCCTT--AATGTATGTGTCGATGAG-AAGAGAGTATGTCT 94510
Query 13961 CAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG--ACCA 14018
| ||||| ||||| || || ||||| || || || || |||| ||||||| |||
Sbjct 94511 CTGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCTGGGACC- 94569
Query 14019 TTGTACCTC-CGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTG 14077
|| || || | || ||| | ||| ||||||| ||||| ||||||||||| ||| |
Sbjct 94570 -TGAACTTCACCAGAGAAA-CGTTCGACCAAGTTCTCATTCACAATACCATCTGAAGCGG 94627
Query 14078 CAAAAAATGCCAATATGTTTTTAATAAAGTATTGC---TCTTCATTGTTGAGTTTTTTCC 14134
|||| || || | | | || ||||| || || |||||| | | || ||||
Sbjct 94628 CAAAGAAGGCAAGAACATGGGAGATGAAGTAGCGCTCATCGTCATTGAGGCGATTGTTCC 94687
Query 14135 AATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTT 14194
| ||| | |||||| || ||||| | || || | ||||| || || |||| |
Sbjct 94688 AGTCGTGAAGATCCTTTGACAGATCGATCTCTTCGGCAGTCCAGAATGAGGCTTCAGCCT 94747
Query 14195 TTTTATACATTACCCATATTTCTTT 14219
| || |||||| ||| || | |||
Sbjct 94748 TCTTGTACATTTGCCAGATCTGTTT 94772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478584600383280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |