Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq689 163 3e-35 >seq689 Length=208963 Score = 163 bits (180), Expect = 3e-35 Identities = 568/865 (66%), Gaps = 25/865 (3%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||| || |||| ||| | || ||||| ||||| || || || | || || || ||| Sbjct 93919 TTTTGGTAATCACCAACACGCTTCTCAAAGAAGTTTGTCTTTCCAGCAAGGGAGATGTTT 93978 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAAT 13488 ||||| || |||||||| || || || | | | || | ||| || | | | Sbjct 93979 TCCATGAAGTCGAATGGGTTGGTGGAGTTGTAGAACTTCTGGTTACCGAGAGCGATGAGG 94038 Query 13489 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13548 | ||| || |||| |||||| || ||||| ||| | | | ||||| || | || Sbjct 94039 AGTCTGTCGGCAACAAACTCGATGTATTGCTTCATGAGAGTAGCGTTCATGCCGAGGAGA 94098 Query 13549 TTTACA-GGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 13607 ||| |||| || ||| || ||||||| ||| || ||||||||| | ||||| Sbjct 94099 CC-ACATGGAAGAGCATCAGTCAAGAATTCTTGTTCGATTTCAACAGCCTCGGTGATAAT 94157 Query 13608 AATCTTA-ATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 13666 |||| || | | || || || | | || || || || | | || |||| Sbjct 94158 G-TCTTGGATGACCTTCTTCGATGGGCGGTTGTTAAGGTGAGAGAAGAGGAGGCAGGCAA 94216 Query 13667 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13726 ||||| || || |||||||| | | || | |||||| || ||||| | || |||| Sbjct 94217 AATCAGTGTGCAGACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTAAGACCCGGCA 94276 Query 13727 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 13786 ||| || || || || ||||| || || | || || || || || ||||| || |||| Sbjct 94277 TCATACCGCGCTTCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAGATACCCT 94336 Query 13787 CAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATATCCAT 13845 |||| |||||||| || | || |||| | || | | || || || |||| ||||| Sbjct 94337 CAACCGCAGCAAAAGCAACGAGACGTTGAGCGAAACAAGATTCTTGGTCTTGA-ATCCAG 94395 Query 13846 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA- 13904 | | ||||| || | || || ||| | || || || || |||| ||| || Sbjct 94396 TGAATGGCCCAATCGGCCTTCTTGCGGATACATGGGATGGTATCAATGGCATCGAACAAG 94455 Query 13905 -ATGTTCCTTCT-CTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTA-TACATTT 13960 |||||| ||| |||| | | ||| ||||||||| || || || ||| | || | | Sbjct 94456 TATGTTC--TCTGCTTTGGCTCCTT--AATGTATGTGTCGATGAG-AAGAGAGTATGTCT 94510 Query 13961 CAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG--ACCA 14018 | ||||| ||||| || || ||||| || || || || |||| ||||||| ||| Sbjct 94511 CTGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCTGGGACC- 94569 Query 14019 TTGTACCTC-CGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTG 14077 || || || | || ||| | ||| ||||||| ||||| ||||||||||| ||| | Sbjct 94570 -TGAACTTCACCAGAGAAA-CGTTCGACCAAGTTCTCATTCACAATACCATCTGAAGCGG 94627 Query 14078 CAAAAAATGCCAATATGTTTTTAATAAAGTATTGC---TCTTCATTGTTGAGTTTTTTCC 14134 |||| || || | | | || ||||| || || |||||| | | || |||| Sbjct 94628 CAAAGAAGGCAAGAACATGGGAGATGAAGTAGCGCTCATCGTCATTGAGGCGATTGTTCC 94687 Query 14135 AATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTT 14194 | ||| | |||||| || ||||| | || || | ||||| || || |||| | Sbjct 94688 AGTCGTGAAGATCCTTTGACAGATCGATCTCTTCGGCAGTCCAGAATGAGGCTTCAGCCT 94747 Query 14195 TTTTATACATTACCCATATTTCTTT 14219 | || |||||| ||| || | ||| Sbjct 94748 TCTTGTACATTTGCCAGATCTGTTT 94772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478584600383280