Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq667 132 4e-26 >seq667 Length=237617 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| | ||| |||||||| |||| ||||||||||||||| | ||||||||| ||| Sbjct 143366 CCACCACGTAATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGAC 143425 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || || | || ||||||||||| || || || |||| || || ||||| | || Sbjct 143426 AAAGTTCGGCCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGA 143485 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || |||| ||| || || ||| |||||| | ||| || Sbjct 143486 ATTCCTTCCTTGTCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAACT 143545 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || | || || ||||| || || | ||| |||||||| ||||||||| Sbjct 143546 TCCAGTGTGATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCATT 143593 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| | ||| | ||| | |||| ||||||||||| || | |||||||| ||| Sbjct 143594 CCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGAC 143653 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || || | || |||| ||| || || ||||| |||| || || ||||| | || Sbjct 143654 AAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGGA 143713 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | || || || || |||| ||| || | ||| ||||| | |||||| Sbjct 143714 ATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGACT 143773 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || |||||||| | || |||||||| || ||||| Sbjct 143774 TCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381366337144716