Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq689 230 3e-55 seq698 138 2e-27 >seq689 Length=208963 Score = 230 bits (254), Expect = 3e-55 Identities = 563/846 (67%), Gaps = 27/846 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| |||||| | ||||| || ||||| | ||||||| |||||||| Sbjct 94766 ATCTGGCAAATGTACAAGAAGGCTGAAGCCTCATTCTGGACTGCCGAAGAGATCGATCTG 94707 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||| ||| | | ||| | | ||| |||||| | || || || Sbjct 94706 TCAAAGGATCTTCACGACTGGAACAATCGCCTCAATGACGATGAGCGCTACTTCATCTCC 94647 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 || || | ||||||||||||| || ||||| || || || || || || | ||| Sbjct 94646 CATGTTCTTGCCTTCTTTGCCGCTTCAGATGGTATTGTGAATGAGAACTTGGTCGAACGT 94587 Query 125199 TTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 |||||| | |||| | | ||||| | ||||| ||||| ||||| |||||||| Sbjct 94586 TTCTCTGGTGAAGTTCA-GGTCCCAGAAGCACGATGCTTCTACGGCTTCCAGATCATGAT 94528 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCA 125317 |||||| | ||||| || | |||||| || || |||| |||||| || || | Sbjct 94527 GGAGAACATCCACTCAGAGACATACTCTCTTCTCATCGACACATACATTAAGGAGCCAAA 94468 Query 125318 ACGTAAACACATGC-TCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTC 125376 | | | |||| | | || | || || || || | || | ||| || || ||||| Sbjct 94467 GCAGAGA-ACATACTTGTTCGATGCCATTGATACCATCCCATGTATCCGCAAGAAGGCCG 94409 Query 125377 AATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCAT 125436 | |||| |||| ||||| | ||| | | |||| | ||| | | || || || | Sbjct 94408 ATTGGGCCATTCACTGGATTCAAGACCAAGAATCTTGTTTCGCTCAACGTCTCGTTGCTT 94349 Query 125437 TCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGA 125496 | || || || ||||| |||||||| |||||| |||||| ||||||| ||| | |||| Sbjct 94348 TTGCTGCGGTTGAGGGTATCTTCTTCTCGGGTTCTTTTGCATCCATCTTCTGGTTGAAGA 94289 Query 125497 AGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCC 125556 ||||||| | ||||| || || || | |||||| || || ||||| || ||||| | Sbjct 94288 AGCGCGGTATGATGCCGGGTCTTACATTCTCTAACGAATTGATCTCTCGTGATGAGGGTC 94229 Query 125557 TACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCA 125616 | ||| ||| |||||| || || || || || | | | | || ||| Sbjct 94228 TGCACACTGATTTTGCCTGCCTCCTCTT------CTCTCACCTTAACAACCGC----CCA 94179 Query 125617 GCGATGAAAAGGTCATC---AACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673 ||| | ||||||||| ||||| | ||||| || || || |||||||| || Sbjct 94178 TCGA--AGAAGGTCATCCAAGACATTATCACCGAGGCTGTTGAAATCGAACAAGAATTCT 94121 Query 125674 TAACCGAATCCCTACC----GGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAG 125729 | || || | || || |||| | | ||||||||| | || ||| | Sbjct 94120 TGACTGATGCTCTTCCATGTGGTC----TCCTCGGCATGAACGCTACTCTCATGAAGCAA 94065 Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTACAAC 125789 ||||| |||||||| || || | || || || | | || ||| | |||||| Sbjct 94064 TACATCGAGTTTGTTGCCGACAGACTCCTCATCGCTCTCGGTAACCAGAAGTTCTACAAC 94005 Query 125790 GCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTC 125849 ||| || || || || |||||| | ||| || || | || ||||| ||||| || Sbjct 94004 TCCACCAACCCATTCGACTTCATGGAAAACATCTCCCTTGCTGGAAAGACAAACTTCTTT 93945 Query 125850 GAGAAG 125855 |||||| Sbjct 93944 GAGAAG 93939 >seq698 Length=89367 Score = 138 bits (152), Expect = 2e-27 Identities = 330/496 (67%), Gaps = 6/496 (1%) Strand=Plus/Minus Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 |||||||| ||||| ||||| ||||| ||||| ||| | ||| | ||| | || || | Sbjct 2661 GATACGTTGACCAGGGTGGCAACAAACGACCAGGTGCTTTTGCCATTTACCTTGAGCCAT 2602 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||| |||||||||| || || | || | ||||| ||| ||| ||||| | || Sbjct 2601 GGCACTCGGACGTTTTCGAATTCCTTGACCTCCGCAAGAACCACGGCAAGGAAGAAGTAC 2542 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044 |||| | ||| | || ||||| || ||| | || ||| | || ||||| || || | Sbjct 2541 GAGCTCGTGACCTTTTCTATGCTCTTTGGATTCCTGATCTTTTTATGAAACGAGTTGAAA 2482 Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104 | | | |||| | | ||||| | | | || ||||| |||| || | Sbjct 2481 AGAATCAAGAGTGGACTTTGTTCTGCCCTCATGAGGCTCCAGGTCTAGCCGACGTCTATG 2422 Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAG 97164 | || || ||||||| | || | ||||| |||||||| || || ||||| Sbjct 2421 GAGATGAATTTGAGGTCCTTTATGCCAAATACGAACAAGAGGGGCGTG--GTC-GACGAA 2365 Query 97165 TCG---ATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTC 97221 | | || | | | || ||| | || ||| | ||| ||| |||||||||| || Sbjct 2364 CCATGAAAGCTCAAAAGCTTTGGTACGCTATCCTCGAGGCACAGACCGAGACTGGAAATC 2305 Query 97222 CGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCA 97281 | | ||| |||||||||||| || || || || ||||| ||| ||||||| || | Sbjct 2304 CATTCATGCTCTACAAGGATGCCTGCAACCGAAAGAGCAATCAAAAGAACTTGGGTACTA 2245 Query 97282 TCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAG 97341 ||||| |||| || |||| || |||||| | |||||| | |||| || || || | Sbjct 2244 TCAAGAGCTCTAACTTGTGTACCGAAATTATTGAGTACACTGCTCCAGATGAAGTCGCTG 2185 Query 97342 TTTGCGTTCTGGCATC 97357 ||||| ||| || || Sbjct 2184 TTTGCAATCTCGCTTC 2169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741052697205520