Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq667 123 2e-23
>seq667
Length=237617
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 43904 AATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGC 43963
||||| |||||||| || || |||||||| ||||||||||| ||||| || ||
Sbjct 143375 AATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGACAAAGTTCGG 143434
Query 43964 TCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCT 44023
|||| ||||||||||| ||||| || |||| |||||||| || | || | |||||
Sbjct 143435 CCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCCTTCC 143494
Query 44024 TTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTA 44083
|| || || || ||| || | ||| || |||| | ||| || || | ||
Sbjct 143495 TTGTCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAACTTCCAGTGTG 143554
Query 44084 ATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|||||||| || || |||||||||||||| ||||||||
Sbjct 143555 ATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 43904 AATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGC 43963
||||| | ||| | || || |||||||| || ||||| || ||||| || ||
Sbjct 143603 AATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGACAAAGTTCGG 143662
Query 43964 TCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCT 44023
|||| |||| ||| ||||| ||||| |||| |||||||| || | || | || ||
Sbjct 143663 CCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGGAATCCCCTCC 143722
Query 44024 TTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTA 44083
|||||| || || ||| || || ||| || |||| | ||| || || | ||
Sbjct 143723 TTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGACTTCCAATGTG 143782
Query 44084 ATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || || ||||| || ||||||||||| || |||||
Sbjct 143783 ATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354774564655896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |