Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq689 114 1e-20
>seq689
Length=208963
Score = 114 bits (126), Expect = 1e-20
Identities = 288/435 (66%), Gaps = 2/435 (0%)
Strand=Plus/Plus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
||||| || || | ||| | || ||||| |||||||| ||||| | | || || |||
Sbjct 93919 TTTTGGTAATCACCAACACGCTTCTCAAAGAAGTTTGTCTTTCCAGCAAGGGAGATGTTT 93978
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAAC 12979
||||| || ||||| || || | || ||| | || | || | | | |
Sbjct 93979 TCCATGAAGTCGAATGGGTTGGTGGAGTTGTAGAACTTCTGGTTACCGAGAGCGATGAGG 94038
Query 12980 AATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 13039
| |||||| ||||||||||| ||||| || ||||| | | | |||||| || | |
Sbjct 94039 AGTCTGTCGGCAACAAACTCGATGTATTGCTTCATGAGAGTAGCGTTCATGCCGAGGAGA 94098
Query 13040 TTTACA-GGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTAT 13098
||| || | ||| || || || || | || ||| || ||||| || ||| | | ||
Sbjct 94099 CC-ACATGGAAGAGCATCAGTCAAGAATTCTTGTTCGATTTCAACAGCCTCGGTGATAAT 94157
Query 13099 GTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACATGCAAA 13158
|||| || || |||| |||| | || || || || | | || |||||
Sbjct 94158 GTCTTGGATGACCTTCTTCGATGGGCGGTTGTTAAGGTGAGAGAAGAGGAGGCAGGCAAA 94217
Query 13159 ATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCAT 13218
|||| ||||| || ||||| | | || | ||||| || ||||| |||||||||||
Sbjct 94218 ATCAGTGTGCAGACCCTCATCACGAGAGATCAATTCGTTAGAGAATGTAAGACCCGGCAT 94277
Query 13219 AAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTC 13278
| || || || || | ||| || || | ||||| |||||||| || || || || ||
Sbjct 94278 CATACCGCGCTTCTTCAACCAGAAGATGGATGCAAAAGAACCCGAGAAGAAGATACCCTC 94337
Query 13279 AACTGCTGCAAACGC 13293
||| || ||||| ||
Sbjct 94338 AACCGCAGCAAAAGC 94352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430978712676204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |