Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq667 96.9 3e-15 >seq667 Length=237617 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 94790 AATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTG 94849 |||| |||||||||||| | ||| |||||||| | || ||||| || ||| | Sbjct 143375 AATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGACAAAGTTCGG 143434 Query 94850 GAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909 ||| |||| ||||| || | ||||| | | |||||||||||| ||||| ||||| Sbjct 143435 CCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCCTTCC 143494 Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969 ||||| | || || | || ||| | | | ||||| | || || || | ||| Sbjct 143495 TTGTCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAACTTCCAGTGTG 143554 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || || | ||| ||||||||||| ||||| Sbjct 143555 ATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || ||| || | |||| || ||| | ||| | || ||||| || | ||| | Sbjct 143586 TTTGCATTCCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGT 143645 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 |||| || ||| | ||| ||||| || ||||| ||||||| | | |||||||| Sbjct 143646 AATCTGACAAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGAT 143705 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 |||| ||||| || || || || | || || | || ||| | | ||||| | Sbjct 143706 CTGGTGGAATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATG 143765 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || | ||||| || ||||| || | || ||||||||||||||||| Sbjct 143766 ACTCGACTTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820 Score = 82.4 bits (90), Expect = 7e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||||||||| || | ||| ||||| | ||| | |||||||| || || || Sbjct 143852 GTAGATTCCTTCTGGATGTTGTAATCTGAGAGAGTACGGCCATCCTCCAATTGCTTGCCA 143911 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | || || | | ||| ||||| || || ||||| || ||||| | || |||| |||| Sbjct 143912 GCGAAAATGAGACGTTGTTGATCGGGTGGGATACCCTCCTTGTCCTGGATCTTTGACTTG 143971 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | ||| || || | ||||| |||| |||||||| || ||||||||||| Sbjct 143972 ACGTTGTCGATGGTATCTGAAGACTCGACCTCAAGGGTGATGGTCTTGCCAGTAAGAGTC 144031 Query 94991 TTCAC 94995 || || Sbjct 144032 TTGAC 144036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448287266244720